Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05160

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_05150 and AO356_05155 are separated by 17 nucleotidesAO356_05155 and AO356_05160 overlap by 14 nucleotidesAO356_05160 and AO356_05165 are separated by 187 nucleotides AO356_05150: AO356_05150 - keto-deoxy-phosphogluconate aldolase, at 1,155,592 to 1,156,257 _05150 AO356_05155: AO356_05155 - 6-phosphogluconolactonase, at 1,156,275 to 1,156,988 _05155 AO356_05160: AO356_05160 - glucose-6-phosphate dehydrogenase, at 1,156,975 to 1,158,444 _05160 AO356_05165: AO356_05165 - transcriptional regulator, at 1,158,632 to 1,159,501 _05165 Position (kb) 1156 1157 1158 1159Strain fitness (log2 ratio) -2 -1 0 1 2at 1156.289 kb on - strandat 1156.981 kb on - strandat 1156.989 kb on - strandat 1157.190 kb on - strand, within AO356_05160at 1157.217 kb on - strand, within AO356_05160at 1157.379 kb on - strand, within AO356_05160at 1157.379 kb on - strand, within AO356_05160at 1157.379 kb on - strand, within AO356_05160at 1157.379 kb on - strand, within AO356_05160at 1157.379 kb on - strand, within AO356_05160at 1157.589 kb on - strand, within AO356_05160at 1157.589 kb on - strand, within AO356_05160at 1157.651 kb on - strand, within AO356_05160at 1157.778 kb on - strand, within AO356_05160at 1157.838 kb on - strand, within AO356_05160at 1157.838 kb on - strand, within AO356_05160at 1157.838 kb on - strand, within AO356_05160at 1157.838 kb on - strand, within AO356_05160at 1157.919 kb on - strand, within AO356_05160at 1157.938 kb on - strand, within AO356_05160at 1157.938 kb on - strand, within AO356_05160at 1158.078 kb on - strand, within AO356_05160at 1158.078 kb on - strand, within AO356_05160at 1158.078 kb on - strand, within AO356_05160at 1158.078 kb on - strand, within AO356_05160at 1158.150 kb on - strand, within AO356_05160at 1158.183 kb on - strand, within AO356_05160at 1158.183 kb on - strand, within AO356_05160at 1158.183 kb on - strand, within AO356_05160at 1158.243 kb on - strand, within AO356_05160at 1158.357 kb on - strandat 1158.357 kb on - strandat 1158.512 kb on + strandat 1158.576 kb on + strandat 1158.577 kb on - strandat 1158.577 kb on - strandat 1158.602 kb on - strandat 1158.620 kb on + strandat 1158.621 kb on - strandat 1158.621 kb on - strandat 1158.621 kb on - strandat 1158.631 kb on + strandat 1158.631 kb on + strandat 1158.631 kb on + strandat 1158.631 kb on + strandat 1158.631 kb on + strandat 1158.632 kb on - strandat 1158.652 kb on - strandat 1158.881 kb on + strand, within AO356_05165at 1158.881 kb on + strand, within AO356_05165at 1158.881 kb on + strand, within AO356_05165at 1158.882 kb on - strand, within AO356_05165at 1158.882 kb on - strand, within AO356_05165at 1158.882 kb on - strand, within AO356_05165at 1158.897 kb on + strand, within AO356_05165at 1158.923 kb on + strand, within AO356_05165at 1158.923 kb on - strand, within AO356_05165at 1158.924 kb on - strand, within AO356_05165at 1158.924 kb on - strand, within AO356_05165at 1158.925 kb on + strand, within AO356_05165at 1159.194 kb on - strand, within AO356_05165at 1159.194 kb on - strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.343 kb on + strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.344 kb on - strand, within AO356_05165at 1159.345 kb on + strand, within AO356_05165at 1159.345 kb on + strand, within AO356_05165at 1159.345 kb on + strand, within AO356_05165at 1159.346 kb on - strand, within AO356_05165

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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1,156,289 - -0.3
1,156,981 - +1.4
1,156,989 - -0.4
1,157,190 - AO356_05160 0.15 +0.8
1,157,217 - AO356_05160 0.16 +1.1
1,157,379 - AO356_05160 0.27 +0.5
1,157,379 - AO356_05160 0.27 -1.3
1,157,379 - AO356_05160 0.27 +0.4
1,157,379 - AO356_05160 0.27 +1.2
1,157,379 - AO356_05160 0.27 +0.4
1,157,589 - AO356_05160 0.42 +1.0
1,157,589 - AO356_05160 0.42 +2.5
1,157,651 - AO356_05160 0.46 +0.7
1,157,778 - AO356_05160 0.55 +0.8
1,157,838 - AO356_05160 0.59 +1.7
1,157,838 - AO356_05160 0.59 -0.2
1,157,838 - AO356_05160 0.59 -1.5
1,157,838 - AO356_05160 0.59 +0.0
1,157,919 - AO356_05160 0.64 +0.2
1,157,938 - AO356_05160 0.66 +1.6
1,157,938 - AO356_05160 0.66 +0.7
1,158,078 - AO356_05160 0.75 -1.2
1,158,078 - AO356_05160 0.75 +0.3
1,158,078 - AO356_05160 0.75 +0.5
1,158,078 - AO356_05160 0.75 -0.9
1,158,150 - AO356_05160 0.80 +1.1
1,158,183 - AO356_05160 0.82 +0.3
1,158,183 - AO356_05160 0.82 +0.7
1,158,183 - AO356_05160 0.82 +0.3
1,158,243 - AO356_05160 0.86 +0.9
1,158,357 - -0.0
1,158,357 - +0.6
1,158,512 + +0.5
1,158,576 + -0.2
1,158,577 - -0.7
1,158,577 - -0.6
1,158,602 - +0.9
1,158,620 + -0.3
1,158,621 - -1.5
1,158,621 - +0.1
1,158,621 - -0.9
1,158,631 + -0.4
1,158,631 + -1.5
1,158,631 + -1.5
1,158,631 + -1.7
1,158,631 + +0.2
1,158,632 - -0.2
1,158,652 - -0.6
1,158,881 + AO356_05165 0.29 -0.3
1,158,881 + AO356_05165 0.29 +0.1
1,158,881 + AO356_05165 0.29 +0.2
1,158,882 - AO356_05165 0.29 -0.3
1,158,882 - AO356_05165 0.29 +0.1
1,158,882 - AO356_05165 0.29 +0.7
1,158,897 + AO356_05165 0.30 -1.6
1,158,923 + AO356_05165 0.33 +0.2
1,158,923 - AO356_05165 0.33 +0.7
1,158,924 - AO356_05165 0.34 -0.0
1,158,924 - AO356_05165 0.34 -0.2
1,158,925 + AO356_05165 0.34 -1.9
1,159,194 - AO356_05165 0.65 -0.2
1,159,194 - AO356_05165 0.65 +0.0
1,159,343 + AO356_05165 0.82 -0.5
1,159,343 + AO356_05165 0.82 -0.1
1,159,343 + AO356_05165 0.82 -0.1
1,159,343 + AO356_05165 0.82 -0.2
1,159,343 + AO356_05165 0.82 -0.4
1,159,343 + AO356_05165 0.82 -0.1
1,159,343 + AO356_05165 0.82 +0.6
1,159,343 + AO356_05165 0.82 +0.0
1,159,343 + AO356_05165 0.82 +0.3
1,159,343 + AO356_05165 0.82 -0.0
1,159,343 + AO356_05165 0.82 -0.3
1,159,343 + AO356_05165 0.82 -0.2
1,159,343 + AO356_05165 0.82 +0.4
1,159,343 + AO356_05165 0.82 -1.8
1,159,343 + AO356_05165 0.82 -1.6
1,159,343 + AO356_05165 0.82 -1.5
1,159,343 + AO356_05165 0.82 +0.5
1,159,343 + AO356_05165 0.82 +0.3
1,159,343 + AO356_05165 0.82 +0.8
1,159,343 + AO356_05165 0.82 -0.2
1,159,343 + AO356_05165 0.82 -0.0
1,159,343 + AO356_05165 0.82 -0.1
1,159,343 + AO356_05165 0.82 -0.6
1,159,343 + AO356_05165 0.82 -1.4
1,159,343 + AO356_05165 0.82 -0.6
1,159,343 + AO356_05165 0.82 +1.1
1,159,343 + AO356_05165 0.82 -0.4
1,159,343 + AO356_05165 0.82 +0.3
1,159,344 - AO356_05165 0.82 -0.0
1,159,344 - AO356_05165 0.82 -0.9
1,159,344 - AO356_05165 0.82 +0.1
1,159,344 - AO356_05165 0.82 -0.5
1,159,344 - AO356_05165 0.82 -0.1
1,159,344 - AO356_05165 0.82 -1.7
1,159,344 - AO356_05165 0.82 +0.2
1,159,344 - AO356_05165 0.82 -0.9
1,159,344 - AO356_05165 0.82 -0.4
1,159,344 - AO356_05165 0.82 +0.3
1,159,344 - AO356_05165 0.82 -0.1
1,159,344 - AO356_05165 0.82 -0.5
1,159,344 - AO356_05165 0.82 -0.3
1,159,344 - AO356_05165 0.82 -1.4
1,159,344 - AO356_05165 0.82 +0.5
1,159,344 - AO356_05165 0.82 -0.3
1,159,344 - AO356_05165 0.82 -0.4
1,159,344 - AO356_05165 0.82 -0.6
1,159,344 - AO356_05165 0.82 -1.1
1,159,345 + AO356_05165 0.82 -0.6
1,159,345 + AO356_05165 0.82 -1.5
1,159,345 + AO356_05165 0.82 -0.6
1,159,346 - AO356_05165 0.82 -0.4

Or see this region's nucleotide sequence