Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04870 and AO356_04875 are separated by 269 nucleotides AO356_04875 and AO356_04880 are separated by 3 nucleotides
AO356_04870: AO356_04870 - TetR family transcriptional regulator, at 1,093,982 to 1,094,614
_04870
AO356_04875: AO356_04875 - antibiotic transporter, at 1,094,884 to 1,096,041
_04875
AO356_04880: AO356_04880 - multidrug transporter, at 1,096,045 to 1,099,209
_04880
Position (kb)
1094
1095
1096
1097 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1093.925 kb on + strand at 1093.926 kb on - strand at 1093.933 kb on - strand at 1093.969 kb on + strand at 1094.014 kb on + strand at 1094.015 kb on - strand at 1094.106 kb on + strand, within AO356_04870 at 1094.106 kb on + strand, within AO356_04870 at 1094.106 kb on + strand, within AO356_04870 at 1094.107 kb on - strand, within AO356_04870 at 1094.107 kb on - strand, within AO356_04870 at 1094.107 kb on - strand, within AO356_04870 at 1094.203 kb on + strand, within AO356_04870 at 1094.203 kb on + strand, within AO356_04870 at 1094.203 kb on + strand, within AO356_04870 at 1094.204 kb on - strand, within AO356_04870 at 1094.204 kb on - strand, within AO356_04870 at 1094.204 kb on - strand, within AO356_04870 at 1094.269 kb on + strand, within AO356_04870 at 1094.269 kb on + strand, within AO356_04870 at 1094.269 kb on + strand, within AO356_04870 at 1094.269 kb on + strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.270 kb on - strand, within AO356_04870 at 1094.469 kb on + strand, within AO356_04870 at 1094.469 kb on + strand, within AO356_04870 at 1094.469 kb on + strand, within AO356_04870 at 1094.470 kb on - strand, within AO356_04870 at 1094.470 kb on - strand, within AO356_04870 at 1094.470 kb on - strand, within AO356_04870 at 1094.470 kb on - strand, within AO356_04870 at 1094.470 kb on - strand, within AO356_04870 at 1094.470 kb on - strand, within AO356_04870 at 1094.470 kb on - strand, within AO356_04870 at 1094.473 kb on + strand, within AO356_04870 at 1094.473 kb on + strand, within AO356_04870 at 1094.473 kb on + strand, within AO356_04870 at 1094.474 kb on - strand, within AO356_04870 at 1094.474 kb on - strand, within AO356_04870 at 1094.474 kb on - strand, within AO356_04870 at 1094.474 kb on - strand, within AO356_04870 at 1094.474 kb on - strand, within AO356_04870 at 1094.567 kb on + strand at 1094.567 kb on + strand at 1094.568 kb on - strand at 1094.568 kb on - strand at 1094.621 kb on - strand at 1094.621 kb on - strand at 1094.654 kb on + strand at 1094.655 kb on - strand at 1094.655 kb on - strand at 1094.655 kb on - strand at 1094.655 kb on - strand at 1094.675 kb on - strand at 1094.675 kb on - strand at 1094.713 kb on - strand at 1094.713 kb on - strand at 1094.713 kb on - strand at 1094.739 kb on - strand at 1094.739 kb on - strand at 1094.749 kb on - strand at 1094.752 kb on - strand at 1094.787 kb on - strand at 1094.819 kb on + strand at 1094.820 kb on - strand at 1095.003 kb on - strand, within AO356_04875 at 1095.077 kb on + strand, within AO356_04875 at 1095.077 kb on + strand, within AO356_04875 at 1095.078 kb on - strand, within AO356_04875 at 1095.155 kb on - strand, within AO356_04875 at 1095.175 kb on + strand, within AO356_04875 at 1095.176 kb on - strand, within AO356_04875 at 1095.239 kb on - strand, within AO356_04875 at 1095.280 kb on + strand, within AO356_04875 at 1095.280 kb on + strand, within AO356_04875 at 1095.281 kb on - strand, within AO356_04875 at 1095.281 kb on - strand, within AO356_04875 at 1095.281 kb on - strand, within AO356_04875 at 1095.281 kb on - strand, within AO356_04875 at 1095.350 kb on - strand, within AO356_04875 at 1095.362 kb on - strand, within AO356_04875 at 1095.362 kb on - strand, within AO356_04875 at 1095.362 kb on - strand, within AO356_04875 at 1095.469 kb on + strand, within AO356_04875 at 1095.469 kb on + strand, within AO356_04875 at 1095.469 kb on + strand, within AO356_04875 at 1095.469 kb on + strand, within AO356_04875 at 1095.469 kb on + strand, within AO356_04875 at 1095.469 kb on + strand, within AO356_04875 at 1095.470 kb on - strand, within AO356_04875 at 1095.470 kb on - strand, within AO356_04875 at 1095.470 kb on - strand, within AO356_04875 at 1095.672 kb on - strand, within AO356_04875 at 1095.977 kb on + strand at 1096.039 kb on + strand at 1096.039 kb on + strand at 1096.040 kb on - strand at 1096.273 kb on + strand at 1096.273 kb on + strand at 1096.274 kb on - strand at 1096.274 kb on - strand at 1096.274 kb on - strand at 1096.274 kb on - strand at 1096.274 kb on - strand at 1096.274 kb on - strand at 1096.513 kb on + strand, within AO356_04880 at 1096.513 kb on + strand, within AO356_04880 at 1096.513 kb on + strand, within AO356_04880 at 1096.514 kb on - strand, within AO356_04880 at 1096.514 kb on - strand, within AO356_04880 at 1096.514 kb on - strand, within AO356_04880 at 1096.514 kb on - strand, within AO356_04880 at 1096.589 kb on - strand, within AO356_04880 at 1096.867 kb on + strand, within AO356_04880 at 1096.867 kb on + strand, within AO356_04880 at 1096.868 kb on - strand, within AO356_04880 at 1096.868 kb on - strand, within AO356_04880
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,093,925 + -1.4 1,093,926 - +0.6 1,093,933 - -0.1 1,093,969 + -0.9 1,094,014 + -0.5 1,094,015 - -2.3 1,094,106 + AO356_04870 0.20 +0.0 1,094,106 + AO356_04870 0.20 -1.5 1,094,106 + AO356_04870 0.20 -3.2 1,094,107 - AO356_04870 0.20 +0.9 1,094,107 - AO356_04870 0.20 -2.1 1,094,107 - AO356_04870 0.20 -1.9 1,094,203 + AO356_04870 0.35 -0.5 1,094,203 + AO356_04870 0.35 -1.6 1,094,203 + AO356_04870 0.35 -0.4 1,094,204 - AO356_04870 0.35 -0.0 1,094,204 - AO356_04870 0.35 -0.9 1,094,204 - AO356_04870 0.35 -0.8 1,094,269 + AO356_04870 0.45 -1.7 1,094,269 + AO356_04870 0.45 -2.5 1,094,269 + AO356_04870 0.45 -2.5 1,094,269 + AO356_04870 0.45 -3.0 1,094,270 - AO356_04870 0.45 +0.3 1,094,270 - AO356_04870 0.45 -2.8 1,094,270 - AO356_04870 0.45 -2.2 1,094,270 - AO356_04870 0.45 -1.1 1,094,270 - AO356_04870 0.45 -2.1 1,094,270 - AO356_04870 0.45 -0.8 1,094,270 - AO356_04870 0.45 +1.3 1,094,270 - AO356_04870 0.45 -2.4 1,094,270 - AO356_04870 0.45 -0.6 1,094,270 - AO356_04870 0.45 -0.6 1,094,469 + AO356_04870 0.77 -2.3 1,094,469 + AO356_04870 0.77 -2.4 1,094,469 + AO356_04870 0.77 -2.1 1,094,470 - AO356_04870 0.77 -1.3 1,094,470 - AO356_04870 0.77 -2.4 1,094,470 - AO356_04870 0.77 -1.4 1,094,470 - AO356_04870 0.77 -1.2 1,094,470 - AO356_04870 0.77 -1.4 1,094,470 - AO356_04870 0.77 -0.9 1,094,470 - AO356_04870 0.77 -0.9 1,094,473 + AO356_04870 0.78 -1.3 1,094,473 + AO356_04870 0.78 -1.8 1,094,473 + AO356_04870 0.78 -2.9 1,094,474 - AO356_04870 0.78 -1.8 1,094,474 - AO356_04870 0.78 -1.0 1,094,474 - AO356_04870 0.78 -0.6 1,094,474 - AO356_04870 0.78 -2.4 1,094,474 - AO356_04870 0.78 -1.3 1,094,567 + -1.9 1,094,567 + -2.9 1,094,568 - +0.6 1,094,568 - -0.7 1,094,621 - -0.9 1,094,621 - -0.3 1,094,654 + -2.6 1,094,655 - +1.5 1,094,655 - -0.6 1,094,655 - +0.5 1,094,655 - +0.7 1,094,675 - +0.1 1,094,675 - +0.3 1,094,713 - +0.0 1,094,713 - +0.8 1,094,713 - +0.6 1,094,739 - +0.5 1,094,739 - +1.2 1,094,749 - +1.2 1,094,752 - +0.2 1,094,787 - -1.0 1,094,819 + -2.9 1,094,820 - +1.3 1,095,003 - AO356_04875 0.10 +1.3 1,095,077 + AO356_04875 0.17 +0.4 1,095,077 + AO356_04875 0.17 +1.7 1,095,078 - AO356_04875 0.17 +0.8 1,095,155 - AO356_04875 0.23 +0.8 1,095,175 + AO356_04875 0.25 +0.9 1,095,176 - AO356_04875 0.25 +1.5 1,095,239 - AO356_04875 0.31 +1.2 1,095,280 + AO356_04875 0.34 +0.3 1,095,280 + AO356_04875 0.34 +0.7 1,095,281 - AO356_04875 0.34 +1.0 1,095,281 - AO356_04875 0.34 +0.8 1,095,281 - AO356_04875 0.34 +0.5 1,095,281 - AO356_04875 0.34 +1.5 1,095,350 - AO356_04875 0.40 +1.1 1,095,362 - AO356_04875 0.41 +2.0 1,095,362 - AO356_04875 0.41 +0.6 1,095,362 - AO356_04875 0.41 +1.6 1,095,469 + AO356_04875 0.51 +1.0 1,095,469 + AO356_04875 0.51 +0.3 1,095,469 + AO356_04875 0.51 -0.7 1,095,469 + AO356_04875 0.51 +1.1 1,095,469 + AO356_04875 0.51 +1.1 1,095,469 + AO356_04875 0.51 +1.1 1,095,470 - AO356_04875 0.51 +1.0 1,095,470 - AO356_04875 0.51 -1.3 1,095,470 - AO356_04875 0.51 +1.3 1,095,672 - AO356_04875 0.68 +0.3 1,095,977 + +0.3 1,096,039 + +1.3 1,096,039 + +1.0 1,096,040 - +1.7 1,096,273 + +0.7 1,096,273 + +0.8 1,096,274 - +1.0 1,096,274 - +1.0 1,096,274 - +1.1 1,096,274 - +1.4 1,096,274 - +1.2 1,096,274 - +1.0 1,096,513 + AO356_04880 0.15 +0.6 1,096,513 + AO356_04880 0.15 +1.5 1,096,513 + AO356_04880 0.15 +1.6 1,096,514 - AO356_04880 0.15 +1.4 1,096,514 - AO356_04880 0.15 +0.5 1,096,514 - AO356_04880 0.15 +1.6 1,096,514 - AO356_04880 0.15 +0.5 1,096,589 - AO356_04880 0.17 +1.1 1,096,867 + AO356_04880 0.26 +0.1 1,096,867 + AO356_04880 0.26 +1.2 1,096,868 - AO356_04880 0.26 +1.0 1,096,868 - AO356_04880 0.26 -1.5
Or see this region's nucleotide sequence