Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04720 and AO356_04725 are separated by 121 nucleotides AO356_04725 and AO356_04730 are separated by 28 nucleotides AO356_04730 and AO356_04735 are separated by 306 nucleotides
AO356_04720: AO356_04720 - lysine transporter LysE, at 1,061,213 to 1,061,842
_04720
AO356_04725: AO356_04725 - hypothetical protein, at 1,061,964 to 1,062,323
_04725
AO356_04730: AO356_04730 - hypothetical protein, at 1,062,352 to 1,062,762
_04730
AO356_04735: AO356_04735 - hypothetical protein, at 1,063,069 to 1,066,800
_04735
Position (kb)
1062
1063 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1061.397 kb on + strand, within AO356_04720 at 1061.457 kb on + strand, within AO356_04720 at 1061.540 kb on + strand, within AO356_04720 at 1061.541 kb on - strand, within AO356_04720 at 1061.721 kb on + strand, within AO356_04720 at 1061.721 kb on + strand, within AO356_04720 at 1061.721 kb on + strand, within AO356_04720 at 1061.721 kb on + strand, within AO356_04720 at 1061.721 kb on + strand, within AO356_04720 at 1061.722 kb on - strand, within AO356_04720 at 1061.722 kb on - strand, within AO356_04720 at 1061.772 kb on + strand, within AO356_04720 at 1061.772 kb on + strand, within AO356_04720 at 1061.773 kb on - strand, within AO356_04720 at 1061.840 kb on + strand at 1061.840 kb on + strand at 1061.854 kb on - strand at 1061.991 kb on + strand at 1061.991 kb on + strand at 1061.991 kb on + strand at 1062.020 kb on + strand, within AO356_04725 at 1062.020 kb on + strand, within AO356_04725 at 1062.021 kb on - strand, within AO356_04725 at 1062.021 kb on - strand, within AO356_04725 at 1062.045 kb on + strand, within AO356_04725 at 1062.046 kb on - strand, within AO356_04725 at 1062.046 kb on - strand, within AO356_04725 at 1062.073 kb on + strand, within AO356_04725 at 1062.073 kb on + strand, within AO356_04725 at 1062.074 kb on - strand, within AO356_04725 at 1062.074 kb on - strand, within AO356_04725 at 1062.086 kb on + strand, within AO356_04725 at 1062.101 kb on - strand, within AO356_04725 at 1062.101 kb on - strand, within AO356_04725 at 1062.101 kb on - strand, within AO356_04725 at 1062.102 kb on + strand, within AO356_04725 at 1062.106 kb on - strand, within AO356_04725 at 1062.141 kb on - strand, within AO356_04725 at 1062.180 kb on + strand, within AO356_04725 at 1062.180 kb on + strand, within AO356_04725 at 1062.180 kb on + strand, within AO356_04725 at 1062.181 kb on - strand, within AO356_04725 at 1062.181 kb on - strand, within AO356_04725 at 1062.181 kb on - strand, within AO356_04725 at 1062.290 kb on + strand at 1062.290 kb on + strand at 1062.291 kb on - strand at 1062.291 kb on - strand at 1062.613 kb on + strand, within AO356_04730 at 1062.613 kb on + strand, within AO356_04730 at 1062.613 kb on + strand, within AO356_04730 at 1062.679 kb on + strand, within AO356_04730 at 1062.679 kb on + strand, within AO356_04730 at 1062.679 kb on + strand, within AO356_04730 at 1062.679 kb on + strand, within AO356_04730 at 1062.679 kb on + strand, within AO356_04730 at 1062.679 kb on + strand, within AO356_04730 at 1062.680 kb on - strand, within AO356_04730 at 1062.680 kb on - strand, within AO356_04730 at 1062.680 kb on - strand, within AO356_04730 at 1062.680 kb on - strand, within AO356_04730 at 1062.680 kb on - strand, within AO356_04730 at 1062.680 kb on - strand, within AO356_04730 at 1062.680 kb on - strand, within AO356_04730 at 1062.743 kb on + strand at 1062.743 kb on + strand at 1062.744 kb on - strand at 1062.744 kb on - strand at 1062.744 kb on - strand at 1062.798 kb on + strand at 1062.809 kb on + strand at 1062.809 kb on + strand at 1062.810 kb on - strand at 1062.810 kb on - strand at 1062.810 kb on - strand at 1062.826 kb on + strand at 1062.827 kb on - strand at 1062.894 kb on + strand at 1062.894 kb on + strand at 1062.895 kb on - strand at 1063.038 kb on - strand at 1063.071 kb on - strand at 1063.125 kb on + strand at 1063.125 kb on + strand at 1063.125 kb on + strand at 1063.126 kb on - strand at 1063.166 kb on + strand at 1063.166 kb on + strand at 1063.166 kb on + strand at 1063.167 kb on - strand at 1063.167 kb on - strand at 1063.232 kb on + strand at 1063.232 kb on + strand at 1063.233 kb on - strand at 1063.281 kb on - strand at 1063.281 kb on - strand at 1063.281 kb on - strand at 1063.281 kb on - strand at 1063.333 kb on + strand at 1063.355 kb on + strand at 1063.355 kb on + strand at 1063.355 kb on + strand at 1063.355 kb on + strand at 1063.355 kb on + strand at 1063.356 kb on - strand at 1063.356 kb on - strand at 1063.356 kb on - strand at 1063.356 kb on - strand at 1063.356 kb on - strand at 1063.356 kb on - strand at 1063.359 kb on + strand at 1063.359 kb on + strand at 1063.360 kb on - strand at 1063.360 kb on - strand at 1063.360 kb on - strand at 1063.360 kb on - strand at 1063.402 kb on + strand at 1063.402 kb on + strand at 1063.453 kb on - strand, within AO356_04735 at 1063.498 kb on + strand, within AO356_04735 at 1063.498 kb on + strand, within AO356_04735 at 1063.498 kb on + strand, within AO356_04735 at 1063.498 kb on + strand, within AO356_04735 at 1063.498 kb on + strand, within AO356_04735 at 1063.499 kb on - strand, within AO356_04735 at 1063.499 kb on - strand, within AO356_04735 at 1063.499 kb on - strand, within AO356_04735 at 1063.499 kb on - strand, within AO356_04735 at 1063.499 kb on - strand, within AO356_04735 at 1063.499 kb on - strand, within AO356_04735 at 1063.507 kb on - strand, within AO356_04735 at 1063.507 kb on - strand, within AO356_04735 at 1063.507 kb on - strand, within AO356_04735 at 1063.532 kb on + strand, within AO356_04735 at 1063.592 kb on + strand, within AO356_04735 at 1063.593 kb on - strand, within AO356_04735 at 1063.626 kb on + strand, within AO356_04735 at 1063.645 kb on + strand, within AO356_04735 at 1063.645 kb on + strand, within AO356_04735 at 1063.646 kb on - strand, within AO356_04735 at 1063.646 kb on - strand, within AO356_04735 at 1063.646 kb on - strand, within AO356_04735 at 1063.646 kb on - strand, within AO356_04735 at 1063.667 kb on + strand, within AO356_04735 at 1063.667 kb on + strand, within AO356_04735 at 1063.668 kb on - strand, within AO356_04735 at 1063.727 kb on + strand, within AO356_04735 at 1063.728 kb on - strand, within AO356_04735 at 1063.728 kb on - strand, within AO356_04735 at 1063.731 kb on + strand, within AO356_04735 at 1063.731 kb on + strand, within AO356_04735 at 1063.732 kb on - strand, within AO356_04735 at 1063.732 kb on - strand, within AO356_04735 at 1063.732 kb on - strand, within AO356_04735 at 1063.732 kb on - strand, within AO356_04735
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,061,397 + AO356_04720 0.29 +0.8 1,061,457 + AO356_04720 0.39 +1.3 1,061,540 + AO356_04720 0.52 -0.2 1,061,541 - AO356_04720 0.52 -0.6 1,061,721 + AO356_04720 0.81 +0.1 1,061,721 + AO356_04720 0.81 -0.3 1,061,721 + AO356_04720 0.81 -0.3 1,061,721 + AO356_04720 0.81 -0.2 1,061,721 + AO356_04720 0.81 +0.7 1,061,722 - AO356_04720 0.81 -0.4 1,061,722 - AO356_04720 0.81 -0.8 1,061,772 + AO356_04720 0.89 -0.9 1,061,772 + AO356_04720 0.89 +0.6 1,061,773 - AO356_04720 0.89 +1.3 1,061,840 + +1.0 1,061,840 + +0.3 1,061,854 - -0.1 1,061,991 + +0.0 1,061,991 + -0.1 1,061,991 + +0.1 1,062,020 + AO356_04725 0.16 -0.5 1,062,020 + AO356_04725 0.16 -0.1 1,062,021 - AO356_04725 0.16 -0.4 1,062,021 - AO356_04725 0.16 -0.3 1,062,045 + AO356_04725 0.23 -0.8 1,062,046 - AO356_04725 0.23 -0.4 1,062,046 - AO356_04725 0.23 -1.0 1,062,073 + AO356_04725 0.30 +1.2 1,062,073 + AO356_04725 0.30 +0.8 1,062,074 - AO356_04725 0.31 -0.3 1,062,074 - AO356_04725 0.31 -0.1 1,062,086 + AO356_04725 0.34 +0.7 1,062,101 - AO356_04725 0.38 +0.3 1,062,101 - AO356_04725 0.38 -0.2 1,062,101 - AO356_04725 0.38 -0.4 1,062,102 + AO356_04725 0.38 +0.8 1,062,106 - AO356_04725 0.39 +0.6 1,062,141 - AO356_04725 0.49 -0.0 1,062,180 + AO356_04725 0.60 +0.5 1,062,180 + AO356_04725 0.60 +0.4 1,062,180 + AO356_04725 0.60 -0.5 1,062,181 - AO356_04725 0.60 +1.0 1,062,181 - AO356_04725 0.60 -0.5 1,062,181 - AO356_04725 0.60 +1.1 1,062,290 + -0.6 1,062,290 + +0.2 1,062,291 - -2.0 1,062,291 - +0.3 1,062,613 + AO356_04730 0.64 +0.9 1,062,613 + AO356_04730 0.64 +0.1 1,062,613 + AO356_04730 0.64 -2.7 1,062,679 + AO356_04730 0.80 -1.6 1,062,679 + AO356_04730 0.80 +0.6 1,062,679 + AO356_04730 0.80 +0.0 1,062,679 + AO356_04730 0.80 +0.5 1,062,679 + AO356_04730 0.80 -1.2 1,062,679 + AO356_04730 0.80 +0.8 1,062,680 - AO356_04730 0.80 +1.3 1,062,680 - AO356_04730 0.80 +0.6 1,062,680 - AO356_04730 0.80 -0.3 1,062,680 - AO356_04730 0.80 +0.5 1,062,680 - AO356_04730 0.80 +0.6 1,062,680 - AO356_04730 0.80 -1.0 1,062,680 - AO356_04730 0.80 -0.7 1,062,743 + -0.6 1,062,743 + +0.7 1,062,744 - -2.7 1,062,744 - -0.3 1,062,744 - +0.6 1,062,798 + +0.4 1,062,809 + +1.1 1,062,809 + -0.2 1,062,810 - -0.7 1,062,810 - +1.0 1,062,810 - +0.1 1,062,826 + -1.3 1,062,827 - +0.7 1,062,894 + -0.1 1,062,894 + +0.3 1,062,895 - +1.9 1,063,038 - +0.1 1,063,071 - -0.0 1,063,125 + +0.1 1,063,125 + -0.2 1,063,125 + -1.6 1,063,126 - +0.3 1,063,166 + -0.1 1,063,166 + +0.3 1,063,166 + +0.2 1,063,167 - -0.3 1,063,167 - -0.1 1,063,232 + +0.2 1,063,232 + -0.5 1,063,233 - +0.4 1,063,281 - +0.2 1,063,281 - -0.2 1,063,281 - +0.2 1,063,281 - +0.9 1,063,333 + +0.2 1,063,355 + +0.1 1,063,355 + +0.4 1,063,355 + +0.0 1,063,355 + +0.6 1,063,355 + -0.1 1,063,356 - +0.4 1,063,356 - +0.8 1,063,356 - -0.1 1,063,356 - -1.1 1,063,356 - +1.0 1,063,356 - +0.3 1,063,359 + -0.1 1,063,359 + +0.7 1,063,360 - +0.4 1,063,360 - +0.6 1,063,360 - +0.1 1,063,360 - -0.3 1,063,402 + +0.5 1,063,402 + -0.0 1,063,453 - AO356_04735 0.10 -0.4 1,063,498 + AO356_04735 0.11 +1.2 1,063,498 + AO356_04735 0.11 -0.1 1,063,498 + AO356_04735 0.11 -0.3 1,063,498 + AO356_04735 0.11 +1.0 1,063,498 + AO356_04735 0.11 -1.1 1,063,499 - AO356_04735 0.12 +0.7 1,063,499 - AO356_04735 0.12 +1.0 1,063,499 - AO356_04735 0.12 -0.2 1,063,499 - AO356_04735 0.12 -1.3 1,063,499 - AO356_04735 0.12 +0.3 1,063,499 - AO356_04735 0.12 +1.1 1,063,507 - AO356_04735 0.12 -0.0 1,063,507 - AO356_04735 0.12 -0.0 1,063,507 - AO356_04735 0.12 -0.9 1,063,532 + AO356_04735 0.12 -0.0 1,063,592 + AO356_04735 0.14 -1.0 1,063,593 - AO356_04735 0.14 -0.6 1,063,626 + AO356_04735 0.15 -0.6 1,063,645 + AO356_04735 0.15 +0.2 1,063,645 + AO356_04735 0.15 +0.5 1,063,646 - AO356_04735 0.15 +0.0 1,063,646 - AO356_04735 0.15 -1.2 1,063,646 - AO356_04735 0.15 +0.8 1,063,646 - AO356_04735 0.15 +0.2 1,063,667 + AO356_04735 0.16 +0.2 1,063,667 + AO356_04735 0.16 +0.3 1,063,668 - AO356_04735 0.16 +0.2 1,063,727 + AO356_04735 0.18 -0.4 1,063,728 - AO356_04735 0.18 +0.6 1,063,728 - AO356_04735 0.18 -0.5 1,063,731 + AO356_04735 0.18 +0.3 1,063,731 + AO356_04735 0.18 -0.1 1,063,732 - AO356_04735 0.18 -0.0 1,063,732 - AO356_04735 0.18 -0.5 1,063,732 - AO356_04735 0.18 -1.0 1,063,732 - AO356_04735 0.18 -3.0
Or see this region's nucleotide sequence