Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04555 and AO356_04560 are separated by 61 nucleotides AO356_04560 and AO356_04565 are separated by 234 nucleotides
AO356_04555: AO356_04555 - peptidase M48, at 1,026,342 to 1,027,775
_04555
AO356_04560: AO356_04560 - serine peptidase, at 1,027,837 to 1,029,267
_04560
AO356_04565: AO356_04565 - RNA polymerase subunit sigma, at 1,029,502 to 1,030,449
_04565
Position (kb)
1027
1028
1029
1030 Strain fitness (log2 ratio)
-2
-1
0
1 at 1027.137 kb on + strand, within AO356_04555 at 1027.171 kb on - strand, within AO356_04555 at 1027.171 kb on - strand, within AO356_04555 at 1027.171 kb on - strand, within AO356_04555 at 1027.344 kb on + strand, within AO356_04555 at 1027.344 kb on + strand, within AO356_04555 at 1027.344 kb on + strand, within AO356_04555 at 1027.344 kb on + strand, within AO356_04555 at 1027.344 kb on + strand, within AO356_04555 at 1027.344 kb on + strand, within AO356_04555 at 1027.344 kb on + strand, within AO356_04555 at 1027.345 kb on - strand, within AO356_04555 at 1027.345 kb on - strand, within AO356_04555 at 1027.345 kb on - strand, within AO356_04555 at 1027.345 kb on - strand, within AO356_04555 at 1027.345 kb on - strand, within AO356_04555 at 1027.345 kb on - strand, within AO356_04555 at 1027.345 kb on - strand, within AO356_04555 at 1027.345 kb on - strand, within AO356_04555 at 1027.429 kb on - strand, within AO356_04555 at 1027.440 kb on + strand, within AO356_04555 at 1027.554 kb on + strand, within AO356_04555 at 1027.554 kb on + strand, within AO356_04555 at 1027.554 kb on + strand, within AO356_04555 at 1027.554 kb on + strand, within AO356_04555 at 1027.554 kb on + strand, within AO356_04555 at 1027.554 kb on + strand, within AO356_04555 at 1027.554 kb on + strand, within AO356_04555 at 1027.554 kb on + strand, within AO356_04555 at 1027.555 kb on - strand, within AO356_04555 at 1027.620 kb on + strand, within AO356_04555 at 1027.620 kb on + strand, within AO356_04555 at 1027.621 kb on - strand, within AO356_04555 at 1027.790 kb on + strand at 1028.391 kb on + strand, within AO356_04560 at 1028.556 kb on - strand, within AO356_04560 at 1028.556 kb on - strand, within AO356_04560 at 1028.939 kb on + strand, within AO356_04560 at 1028.940 kb on - strand, within AO356_04560 at 1028.940 kb on - strand, within AO356_04560 at 1028.940 kb on - strand, within AO356_04560 at 1029.242 kb on + strand at 1029.243 kb on - strand at 1029.267 kb on + strand at 1029.267 kb on + strand at 1029.267 kb on + strand at 1029.268 kb on - strand at 1029.268 kb on - strand at 1029.294 kb on + strand at 1029.315 kb on + strand at 1029.328 kb on + strand at 1029.329 kb on - strand at 1029.329 kb on - strand at 1029.329 kb on - strand at 1029.336 kb on + strand at 1029.384 kb on + strand at 1029.387 kb on - strand at 1029.719 kb on + strand, within AO356_04565 at 1029.719 kb on + strand, within AO356_04565 at 1029.719 kb on + strand, within AO356_04565 at 1029.719 kb on + strand, within AO356_04565 at 1029.720 kb on - strand, within AO356_04565 at 1029.720 kb on - strand, within AO356_04565 at 1029.720 kb on - strand, within AO356_04565 at 1029.720 kb on - strand, within AO356_04565 at 1029.720 kb on - strand, within AO356_04565 at 1030.081 kb on + strand, within AO356_04565 at 1030.149 kb on + strand, within AO356_04565 at 1030.191 kb on + strand, within AO356_04565 at 1030.191 kb on + strand, within AO356_04565 at 1030.191 kb on + strand, within AO356_04565 at 1030.191 kb on + strand, within AO356_04565 at 1030.191 kb on + strand, within AO356_04565 at 1030.192 kb on - strand, within AO356_04565 at 1030.192 kb on - strand, within AO356_04565
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,027,137 + AO356_04555 0.55 +0.9 1,027,171 - AO356_04555 0.58 +0.4 1,027,171 - AO356_04555 0.58 +0.4 1,027,171 - AO356_04555 0.58 -0.2 1,027,344 + AO356_04555 0.70 -0.6 1,027,344 + AO356_04555 0.70 +0.7 1,027,344 + AO356_04555 0.70 -0.3 1,027,344 + AO356_04555 0.70 -0.4 1,027,344 + AO356_04555 0.70 +0.4 1,027,344 + AO356_04555 0.70 +0.2 1,027,344 + AO356_04555 0.70 -0.0 1,027,345 - AO356_04555 0.70 -1.8 1,027,345 - AO356_04555 0.70 +0.5 1,027,345 - AO356_04555 0.70 -0.3 1,027,345 - AO356_04555 0.70 +1.0 1,027,345 - AO356_04555 0.70 +0.2 1,027,345 - AO356_04555 0.70 +0.5 1,027,345 - AO356_04555 0.70 -1.3 1,027,345 - AO356_04555 0.70 -0.3 1,027,429 - AO356_04555 0.76 +0.1 1,027,440 + AO356_04555 0.77 +1.3 1,027,554 + AO356_04555 0.85 +0.2 1,027,554 + AO356_04555 0.85 +0.5 1,027,554 + AO356_04555 0.85 -2.0 1,027,554 + AO356_04555 0.85 +0.7 1,027,554 + AO356_04555 0.85 +0.8 1,027,554 + AO356_04555 0.85 -0.2 1,027,554 + AO356_04555 0.85 -0.5 1,027,554 + AO356_04555 0.85 -0.0 1,027,555 - AO356_04555 0.85 +0.4 1,027,620 + AO356_04555 0.89 +0.3 1,027,620 + AO356_04555 0.89 +1.0 1,027,621 - AO356_04555 0.89 +0.0 1,027,790 + +0.5 1,028,391 + AO356_04560 0.39 -1.0 1,028,556 - AO356_04560 0.50 -1.0 1,028,556 - AO356_04560 0.50 -0.3 1,028,939 + AO356_04560 0.77 -0.3 1,028,940 - AO356_04560 0.77 +0.7 1,028,940 - AO356_04560 0.77 -0.7 1,028,940 - AO356_04560 0.77 -0.3 1,029,242 + +1.7 1,029,243 - +1.3 1,029,267 + -2.0 1,029,267 + -0.2 1,029,267 + -0.7 1,029,268 - +0.2 1,029,268 - -0.3 1,029,294 + +0.1 1,029,315 + +1.3 1,029,328 + +0.7 1,029,329 - +0.8 1,029,329 - -0.4 1,029,329 - +0.2 1,029,336 + -0.4 1,029,384 + -0.2 1,029,387 - +0.7 1,029,719 + AO356_04565 0.23 +0.6 1,029,719 + AO356_04565 0.23 +0.6 1,029,719 + AO356_04565 0.23 +0.5 1,029,719 + AO356_04565 0.23 +0.2 1,029,720 - AO356_04565 0.23 -0.1 1,029,720 - AO356_04565 0.23 +0.2 1,029,720 - AO356_04565 0.23 -0.6 1,029,720 - AO356_04565 0.23 -0.0 1,029,720 - AO356_04565 0.23 -0.2 1,030,081 + AO356_04565 0.61 -0.4 1,030,149 + AO356_04565 0.68 +1.0 1,030,191 + AO356_04565 0.73 +1.2 1,030,191 + AO356_04565 0.73 +1.2 1,030,191 + AO356_04565 0.73 +0.1 1,030,191 + AO356_04565 0.73 +0.8 1,030,191 + AO356_04565 0.73 +0.7 1,030,192 - AO356_04565 0.73 -2.4 1,030,192 - AO356_04565 0.73 +0.2
Or see this region's nucleotide sequence