Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03850 and AO356_03855 are separated by 110 nucleotides AO356_03855 and AO356_03860 are separated by 169 nucleotides AO356_03860 and AO356_03865 are separated by 11 nucleotides
AO356_03850: AO356_03850 - histidine kinase, at 852,088 to 853,296
_03850
AO356_03855: AO356_03855 - AAA family ATPase, at 853,407 to 854,882
_03855
AO356_03860: AO356_03860 - flagellar assembly protein FliT, at 855,052 to 855,348
_03860
AO356_03865: AO356_03865 - flagellar export chaperone FliS, at 855,360 to 855,755
_03865
Position (kb) 853
854
855 Strain fitness (log2 ratio) -2
-1
0
1
2 at 852.680 kb on + strand, within AO356_03850 at 852.681 kb on - strand, within AO356_03850 at 852.681 kb on - strand, within AO356_03850 at 852.705 kb on + strand, within AO356_03850 at 852.705 kb on + strand, within AO356_03850 at 852.706 kb on - strand, within AO356_03850 at 853.163 kb on + strand, within AO356_03850 at 853.163 kb on + strand, within AO356_03850 at 853.164 kb on - strand, within AO356_03850 at 853.164 kb on - strand, within AO356_03850 at 853.327 kb on - strand at 853.349 kb on + strand at 853.349 kb on + strand at 853.450 kb on + strand at 853.451 kb on - strand at 853.451 kb on - strand at 853.451 kb on - strand at 853.451 kb on - strand at 853.451 kb on - strand at 853.573 kb on + strand, within AO356_03855 at 853.574 kb on - strand, within AO356_03855 at 853.631 kb on + strand, within AO356_03855 at 853.631 kb on + strand, within AO356_03855 at 853.631 kb on + strand, within AO356_03855 at 853.631 kb on + strand, within AO356_03855 at 853.631 kb on + strand, within AO356_03855 at 853.632 kb on - strand, within AO356_03855 at 853.709 kb on - strand, within AO356_03855 at 853.972 kb on + strand, within AO356_03855 at 853.972 kb on + strand, within AO356_03855 at 853.972 kb on + strand, within AO356_03855 at 853.972 kb on + strand, within AO356_03855 at 853.972 kb on + strand, within AO356_03855 at 853.972 kb on + strand, within AO356_03855 at 853.973 kb on - strand, within AO356_03855 at 853.973 kb on - strand, within AO356_03855 at 853.973 kb on - strand, within AO356_03855 at 854.163 kb on - strand, within AO356_03855 at 854.317 kb on + strand, within AO356_03855 at 854.317 kb on + strand, within AO356_03855 at 854.318 kb on - strand, within AO356_03855 at 854.318 kb on - strand, within AO356_03855 at 854.318 kb on - strand, within AO356_03855 at 854.318 kb on - strand, within AO356_03855 at 854.500 kb on + strand, within AO356_03855 at 854.500 kb on + strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.501 kb on - strand, within AO356_03855 at 854.551 kb on + strand, within AO356_03855 at 854.673 kb on + strand, within AO356_03855 at 854.674 kb on - strand, within AO356_03855 at 854.703 kb on + strand, within AO356_03855 at 854.703 kb on + strand, within AO356_03855 at 854.703 kb on + strand, within AO356_03855 at 854.703 kb on + strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.704 kb on - strand, within AO356_03855 at 854.787 kb on + strand at 854.788 kb on - strand at 854.843 kb on + strand at 854.887 kb on + strand at 854.887 kb on + strand at 854.887 kb on + strand at 854.887 kb on + strand at 854.888 kb on - strand at 854.888 kb on - strand at 854.899 kb on + strand at 854.900 kb on - strand at 854.933 kb on + strand at 854.934 kb on - strand at 854.934 kb on - strand at 854.934 kb on - strand at 854.961 kb on - strand at 854.961 kb on - strand at 854.969 kb on + strand at 854.970 kb on - strand at 854.977 kb on + strand at 854.986 kb on - strand at 854.988 kb on + strand at 854.988 kb on + strand at 854.988 kb on + strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.989 kb on - strand at 854.993 kb on - strand at 854.993 kb on - strand at 854.993 kb on - strand at 854.993 kb on - strand at 855.042 kb on + strand at 855.043 kb on - strand at 855.068 kb on + strand at 855.069 kb on - strand at 855.069 kb on - strand at 855.361 kb on + strand at 855.362 kb on - strand at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.487 kb on + strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.488 kb on - strand, within AO356_03865 at 855.493 kb on + strand, within AO356_03865 at 855.494 kb on - strand, within AO356_03865 at 855.605 kb on + strand, within AO356_03865 at 855.605 kb on + strand, within AO356_03865 at 855.641 kb on + strand, within AO356_03865 at 855.641 kb on + strand, within AO356_03865 at 855.642 kb on - strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.672 kb on + strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.673 kb on - strand, within AO356_03865 at 855.742 kb on - strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.761 kb on - strand at 855.761 kb on - strand at 855.761 kb on - strand at 855.785 kb on + strand at 855.785 kb on + strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.786 kb on - strand at 855.787 kb on + strand at 855.787 kb on + strand at 855.796 kb on + strand at 855.797 kb on - strand at 855.797 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 852,680 + AO356_03850 0.49 +0.2 852,681 - AO356_03850 0.49 -0.8 852,681 - AO356_03850 0.49 -0.6 852,705 + AO356_03850 0.51 -1.2 852,705 + AO356_03850 0.51 +0.9 852,706 - AO356_03850 0.51 +0.6 853,163 + AO356_03850 0.89 -0.7 853,163 + AO356_03850 0.89 +0.7 853,164 - AO356_03850 0.89 -0.7 853,164 - AO356_03850 0.89 +1.5 853,327 - +0.1 853,349 + +0.2 853,349 + +0.6 853,450 + +1.1 853,451 - +1.0 853,451 - +1.4 853,451 - +1.5 853,451 - +0.7 853,451 - +1.2 853,573 + AO356_03855 0.11 +1.4 853,574 - AO356_03855 0.11 +0.7 853,631 + AO356_03855 0.15 +0.6 853,631 + AO356_03855 0.15 +1.5 853,631 + AO356_03855 0.15 +0.9 853,631 + AO356_03855 0.15 +2.0 853,631 + AO356_03855 0.15 +0.6 853,632 - AO356_03855 0.15 +1.1 853,709 - AO356_03855 0.20 +0.1 853,972 + AO356_03855 0.38 +1.4 853,972 + AO356_03855 0.38 +0.4 853,972 + AO356_03855 0.38 +1.2 853,972 + AO356_03855 0.38 +0.9 853,972 + AO356_03855 0.38 +0.8 853,972 + AO356_03855 0.38 +1.3 853,973 - AO356_03855 0.38 +0.7 853,973 - AO356_03855 0.38 +1.5 853,973 - AO356_03855 0.38 +1.1 854,163 - AO356_03855 0.51 +1.0 854,317 + AO356_03855 0.62 +0.9 854,317 + AO356_03855 0.62 +1.3 854,318 - AO356_03855 0.62 +0.6 854,318 - AO356_03855 0.62 +0.9 854,318 - AO356_03855 0.62 +0.9 854,318 - AO356_03855 0.62 +1.2 854,500 + AO356_03855 0.74 +0.4 854,500 + AO356_03855 0.74 +0.2 854,501 - AO356_03855 0.74 +1.7 854,501 - AO356_03855 0.74 +1.8 854,501 - AO356_03855 0.74 +0.4 854,501 - AO356_03855 0.74 +0.7 854,501 - AO356_03855 0.74 +1.1 854,501 - AO356_03855 0.74 +0.3 854,551 + AO356_03855 0.78 +0.2 854,673 + AO356_03855 0.86 +1.1 854,674 - AO356_03855 0.86 +1.1 854,703 + AO356_03855 0.88 +1.2 854,703 + AO356_03855 0.88 +0.5 854,703 + AO356_03855 0.88 +0.9 854,703 + AO356_03855 0.88 +0.9 854,704 - AO356_03855 0.88 +1.1 854,704 - AO356_03855 0.88 +0.0 854,704 - AO356_03855 0.88 +1.0 854,704 - AO356_03855 0.88 +0.5 854,704 - AO356_03855 0.88 +1.1 854,787 + +0.4 854,788 - +0.5 854,843 + +1.3 854,887 + +0.2 854,887 + +1.8 854,887 + -0.1 854,887 + +0.8 854,888 - +1.5 854,888 - +1.5 854,899 + +0.9 854,900 - -1.3 854,933 + +2.1 854,934 - +2.1 854,934 - +1.2 854,934 - +0.1 854,961 - -0.2 854,961 - -0.4 854,969 + +0.2 854,970 - +0.5 854,977 + +2.1 854,986 - +0.2 854,988 + +1.2 854,988 + +1.6 854,988 + +2.0 854,989 - +0.5 854,989 - -0.6 854,989 - +0.7 854,989 - -0.6 854,989 - +0.0 854,993 - -0.8 854,993 - -0.6 854,993 - -0.8 854,993 - -0.6 855,042 + +1.0 855,043 - -0.5 855,068 + +0.6 855,069 - +1.1 855,069 - +0.2 855,361 + +0.1 855,362 - +0.7 855,487 + AO356_03865 0.32 -0.1 855,487 + AO356_03865 0.32 -0.0 855,487 + AO356_03865 0.32 +0.8 855,487 + AO356_03865 0.32 +0.1 855,487 + AO356_03865 0.32 -0.6 855,487 + AO356_03865 0.32 -0.1 855,487 + AO356_03865 0.32 +0.8 855,487 + AO356_03865 0.32 -0.4 855,487 + AO356_03865 0.32 +0.8 855,488 - AO356_03865 0.32 -1.9 855,488 - AO356_03865 0.32 +0.4 855,488 - AO356_03865 0.32 -0.6 855,488 - AO356_03865 0.32 -1.5 855,488 - AO356_03865 0.32 +0.0 855,493 + AO356_03865 0.34 +0.3 855,494 - AO356_03865 0.34 -0.2 855,605 + AO356_03865 0.62 +0.7 855,605 + AO356_03865 0.62 +0.3 855,641 + AO356_03865 0.71 +0.7 855,641 + AO356_03865 0.71 +0.2 855,642 - AO356_03865 0.71 +0.3 855,672 + AO356_03865 0.79 +0.1 855,672 + AO356_03865 0.79 +0.9 855,672 + AO356_03865 0.79 -1.6 855,672 + AO356_03865 0.79 -0.3 855,672 + AO356_03865 0.79 -0.1 855,672 + AO356_03865 0.79 -0.0 855,672 + AO356_03865 0.79 +2.2 855,673 - AO356_03865 0.79 +0.8 855,673 - AO356_03865 0.79 +0.8 855,673 - AO356_03865 0.79 +1.0 855,673 - AO356_03865 0.79 -0.2 855,673 - AO356_03865 0.79 -1.0 855,673 - AO356_03865 0.79 -0.1 855,673 - AO356_03865 0.79 -2.2 855,673 - AO356_03865 0.79 -0.3 855,673 - AO356_03865 0.79 -0.5 855,742 - +1.5 855,760 + -0.1 855,760 + +0.2 855,760 + -0.8 855,760 + -0.8 855,760 + +0.6 855,760 + -0.2 855,761 - +0.4 855,761 - +0.7 855,761 - -0.1 855,785 + +0.2 855,785 + +0.5 855,786 - +0.8 855,786 - +0.3 855,786 - +0.9 855,786 - -0.6 855,786 - +0.7 855,786 - -0.3 855,787 + +1.2 855,787 + +0.7 855,796 + +0.6 855,797 - -0.6 855,797 - -0.2
Or see this region's nucleotide sequence