Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03755 and AO356_03760 are separated by 3 nucleotides AO356_03760 and AO356_03765 are separated by 4 nucleotides AO356_03765 and AO356_03770 are separated by 23 nucleotides AO356_03770 and AO356_03775 overlap by 1 nucleotides
AO356_03755: AO356_03755 - flagellar biosynthetic protein FlhB, at 835,061 to 836,197
_03755
AO356_03760: AO356_03760 - flagellar biosynthetic protein FliR, at 836,201 to 836,983
_03760
AO356_03765: AO356_03765 - flagellar biosynthetic protein FliQ, at 836,988 to 837,257
_03765
AO356_03770: AO356_03770 - flagellar biosynthesis protein flip, at 837,281 to 838,030
_03770
AO356_03775: AO356_03775 - flagellar assembly protein FliO, at 838,030 to 838,467
_03775
Position (kb) 836
837
838 Strain fitness (log2 ratio) -1
0
1
2 at 836.049 kb on + strand, within AO356_03755 at 836.049 kb on + strand, within AO356_03755 at 836.226 kb on - strand at 836.259 kb on + strand at 836.260 kb on - strand at 836.417 kb on + strand, within AO356_03760 at 836.418 kb on - strand, within AO356_03760 at 836.512 kb on + strand, within AO356_03760 at 836.513 kb on - strand, within AO356_03760 at 836.513 kb on - strand, within AO356_03760 at 836.513 kb on - strand, within AO356_03760 at 836.844 kb on + strand, within AO356_03760 at 836.844 kb on + strand, within AO356_03760 at 836.844 kb on + strand, within AO356_03760 at 836.845 kb on - strand, within AO356_03760 at 837.008 kb on + strand at 837.008 kb on + strand at 837.008 kb on + strand at 837.009 kb on - strand at 837.009 kb on - strand at 837.016 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.031 kb on + strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.032 kb on - strand, within AO356_03765 at 837.048 kb on + strand, within AO356_03765 at 837.048 kb on + strand, within AO356_03765 at 837.048 kb on + strand, within AO356_03765 at 837.049 kb on - strand, within AO356_03765 at 837.237 kb on + strand at 837.243 kb on + strand at 837.243 kb on + strand at 837.243 kb on + strand at 837.244 kb on - strand at 837.257 kb on + strand at 837.265 kb on + strand at 837.282 kb on + strand at 837.282 kb on + strand at 837.311 kb on - strand at 837.397 kb on + strand, within AO356_03770 at 837.397 kb on + strand, within AO356_03770 at 837.398 kb on - strand, within AO356_03770 at 837.675 kb on + strand, within AO356_03770 at 837.675 kb on + strand, within AO356_03770 at 837.676 kb on - strand, within AO356_03770 at 837.676 kb on - strand, within AO356_03770 at 837.909 kb on + strand, within AO356_03770 at 837.910 kb on - strand, within AO356_03770 at 838.031 kb on + strand at 838.032 kb on - strand at 838.032 kb on - strand at 838.038 kb on + strand at 838.111 kb on + strand, within AO356_03775
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 836,049 + AO356_03755 0.87 -0.0 836,049 + AO356_03755 0.87 -0.9 836,226 - +0.6 836,259 + +0.3 836,260 - +0.2 836,417 + AO356_03760 0.28 -0.2 836,418 - AO356_03760 0.28 -0.0 836,512 + AO356_03760 0.40 +1.0 836,513 - AO356_03760 0.40 +0.6 836,513 - AO356_03760 0.40 -0.4 836,513 - AO356_03760 0.40 +0.5 836,844 + AO356_03760 0.82 +1.2 836,844 + AO356_03760 0.82 -0.8 836,844 + AO356_03760 0.82 +1.1 836,845 - AO356_03760 0.82 +0.9 837,008 + +0.9 837,008 + +0.6 837,008 + +0.4 837,009 - +0.3 837,009 - +0.3 837,016 + AO356_03765 0.10 +1.0 837,031 + AO356_03765 0.16 +0.9 837,031 + AO356_03765 0.16 +1.1 837,031 + AO356_03765 0.16 +1.5 837,031 + AO356_03765 0.16 +0.4 837,031 + AO356_03765 0.16 +1.9 837,031 + AO356_03765 0.16 -0.1 837,032 - AO356_03765 0.16 +0.2 837,032 - AO356_03765 0.16 +0.6 837,032 - AO356_03765 0.16 -0.1 837,032 - AO356_03765 0.16 -0.4 837,032 - AO356_03765 0.16 -1.3 837,032 - AO356_03765 0.16 +0.5 837,048 + AO356_03765 0.22 +1.1 837,048 + AO356_03765 0.22 +0.5 837,048 + AO356_03765 0.22 +0.4 837,049 - AO356_03765 0.23 -0.5 837,237 + -0.4 837,243 + +0.6 837,243 + -0.0 837,243 + +0.9 837,244 - +0.0 837,257 + +0.2 837,265 + +0.5 837,282 + -1.3 837,282 + -0.2 837,311 - +0.9 837,397 + AO356_03770 0.15 +0.6 837,397 + AO356_03770 0.15 -0.1 837,398 - AO356_03770 0.16 +0.8 837,675 + AO356_03770 0.53 +1.2 837,675 + AO356_03770 0.53 +0.2 837,676 - AO356_03770 0.53 -0.1 837,676 - AO356_03770 0.53 +0.1 837,909 + AO356_03770 0.84 +1.0 837,910 - AO356_03770 0.84 +1.6 838,031 + -0.4 838,032 - +0.1 838,032 - +1.0 838,038 + +0.4 838,111 + AO356_03775 0.18 +0.1
Or see this region's nucleotide sequence