Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_03405

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_03400 and AO356_03405 are separated by 2 nucleotidesAO356_03405 and AO356_03410 overlap by 4 nucleotides AO356_03400: AO356_03400 - aminotransferase DegT, at 756,266 to 757,348 _03400 AO356_03405: AO356_03405 - serine acetyltransferase, at 757,351 to 757,926 _03405 AO356_03410: AO356_03410 - acetyltransferase, at 757,923 to 759,773 _03410 Position (kb) 757 758Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 756.453 kb on - strand, within AO356_03400at 756.574 kb on - strand, within AO356_03400at 756.655 kb on + strand, within AO356_03400at 756.811 kb on + strand, within AO356_03400at 756.814 kb on + strand, within AO356_03400at 756.815 kb on - strand, within AO356_03400at 756.821 kb on + strand, within AO356_03400at 756.855 kb on + strand, within AO356_03400at 756.855 kb on + strand, within AO356_03400at 756.904 kb on - strand, within AO356_03400at 756.908 kb on - strand, within AO356_03400at 756.988 kb on + strand, within AO356_03400at 757.021 kb on + strand, within AO356_03400at 757.021 kb on + strand, within AO356_03400at 757.023 kb on + strand, within AO356_03400at 757.024 kb on - strand, within AO356_03400at 757.048 kb on - strand, within AO356_03400at 757.094 kb on - strand, within AO356_03400at 757.094 kb on - strand, within AO356_03400at 757.096 kb on - strand, within AO356_03400at 757.096 kb on - strand, within AO356_03400at 757.113 kb on - strand, within AO356_03400at 757.113 kb on - strand, within AO356_03400at 757.113 kb on - strand, within AO356_03400at 757.114 kb on + strand, within AO356_03400at 757.187 kb on + strand, within AO356_03400at 757.187 kb on + strand, within AO356_03400at 757.188 kb on - strand, within AO356_03400at 757.188 kb on - strand, within AO356_03400at 757.258 kb on - strandat 757.309 kb on + strandat 757.309 kb on + strandat 757.310 kb on - strandat 757.310 kb on - strandat 757.310 kb on - strandat 757.505 kb on + strand, within AO356_03405at 757.505 kb on + strand, within AO356_03405at 757.553 kb on + strand, within AO356_03405at 757.553 kb on + strand, within AO356_03405at 757.631 kb on + strand, within AO356_03405at 757.632 kb on - strand, within AO356_03405at 757.632 kb on - strand, within AO356_03405at 757.667 kb on + strand, within AO356_03405at 757.668 kb on - strand, within AO356_03405at 757.668 kb on - strand, within AO356_03405at 757.702 kb on + strand, within AO356_03405at 757.755 kb on + strand, within AO356_03405at 757.916 kb on + strandat 757.916 kb on + strandat 757.917 kb on - strandat 757.917 kb on - strandat 757.919 kb on + strandat 757.919 kb on + strandat 757.920 kb on - strandat 757.920 kb on - strandat 757.943 kb on + strandat 757.943 kb on + strandat 757.944 kb on - strandat 757.944 kb on - strandat 757.944 kb on - strandat 757.987 kb on + strandat 757.988 kb on - strandat 757.988 kb on - strandat 757.988 kb on - strandat 757.988 kb on - strandat 758.010 kb on + strandat 758.010 kb on + strandat 758.010 kb on + strandat 758.011 kb on - strandat 758.011 kb on - strandat 758.038 kb on + strandat 758.038 kb on + strandat 758.060 kb on - strandat 758.241 kb on + strand, within AO356_03410at 758.242 kb on - strand, within AO356_03410at 758.261 kb on + strand, within AO356_03410at 758.261 kb on + strand, within AO356_03410at 758.262 kb on - strand, within AO356_03410at 758.262 kb on - strand, within AO356_03410at 758.262 kb on - strand, within AO356_03410at 758.262 kb on - strand, within AO356_03410at 758.283 kb on - strand, within AO356_03410at 758.530 kb on + strand, within AO356_03410at 758.531 kb on - strand, within AO356_03410at 758.531 kb on - strand, within AO356_03410at 758.531 kb on - strand, within AO356_03410at 758.531 kb on - strand, within AO356_03410at 758.563 kb on - strand, within AO356_03410at 758.630 kb on + strand, within AO356_03410at 758.631 kb on - strand, within AO356_03410at 758.647 kb on + strand, within AO356_03410at 758.737 kb on - strand, within AO356_03410at 758.803 kb on + strand, within AO356_03410at 758.823 kb on + strand, within AO356_03410at 758.870 kb on - strand, within AO356_03410at 758.881 kb on + strand, within AO356_03410at 758.881 kb on + strand, within AO356_03410at 758.881 kb on + strand, within AO356_03410at 758.881 kb on + strand, within AO356_03410at 758.881 kb on + strand, within AO356_03410at 758.882 kb on - strand, within AO356_03410at 758.882 kb on - strand, within AO356_03410at 758.882 kb on - strand, within AO356_03410at 758.884 kb on + strand, within AO356_03410at 758.885 kb on - strand, within AO356_03410at 758.920 kb on + strand, within AO356_03410at 758.920 kb on + strand, within AO356_03410at 758.921 kb on - strand, within AO356_03410at 758.921 kb on - strand, within AO356_03410

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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756,453 - AO356_03400 0.17 -1.4
756,574 - AO356_03400 0.28 -1.6
756,655 + AO356_03400 0.36 -1.1
756,811 + AO356_03400 0.50 -1.6
756,814 + AO356_03400 0.51 -2.0
756,815 - AO356_03400 0.51 -0.8
756,821 + AO356_03400 0.51 -2.0
756,855 + AO356_03400 0.54 -0.5
756,855 + AO356_03400 0.54 +0.2
756,904 - AO356_03400 0.59 -2.3
756,908 - AO356_03400 0.59 -2.3
756,988 + AO356_03400 0.67 -0.4
757,021 + AO356_03400 0.70 -1.1
757,021 + AO356_03400 0.70 -0.8
757,023 + AO356_03400 0.70 -2.3
757,024 - AO356_03400 0.70 -2.6
757,048 - AO356_03400 0.72 -2.0
757,094 - AO356_03400 0.76 -1.6
757,094 - AO356_03400 0.76 -1.1
757,096 - AO356_03400 0.77 -0.4
757,096 - AO356_03400 0.77 -1.8
757,113 - AO356_03400 0.78 +1.2
757,113 - AO356_03400 0.78 -0.8
757,113 - AO356_03400 0.78 -1.8
757,114 + AO356_03400 0.78 -2.8
757,187 + AO356_03400 0.85 -1.3
757,187 + AO356_03400 0.85 -1.8
757,188 - AO356_03400 0.85 -1.8
757,188 - AO356_03400 0.85 -1.4
757,258 - -1.1
757,309 + -1.4
757,309 + -2.7
757,310 - +0.6
757,310 - -1.6
757,310 - -2.1
757,505 + AO356_03405 0.27 -0.4
757,505 + AO356_03405 0.27 -1.1
757,553 + AO356_03405 0.35 -0.6
757,553 + AO356_03405 0.35 -2.9
757,631 + AO356_03405 0.49 -1.4
757,632 - AO356_03405 0.49 -2.1
757,632 - AO356_03405 0.49 -1.8
757,667 + AO356_03405 0.55 -2.0
757,668 - AO356_03405 0.55 -1.1
757,668 - AO356_03405 0.55 -1.1
757,702 + AO356_03405 0.61 -2.8
757,755 + AO356_03405 0.70 -0.2
757,916 + -2.7
757,916 + -1.1
757,917 - -1.8
757,917 - -1.4
757,919 + -1.6
757,919 + -1.1
757,920 - -0.9
757,920 - -2.1
757,943 + +2.2
757,943 + -0.4
757,944 - -0.8
757,944 - -0.7
757,944 - -2.4
757,987 + +0.3
757,988 - -0.6
757,988 - -0.6
757,988 - -2.0
757,988 - -0.7
758,010 + -0.0
758,010 + +0.2
758,010 + +0.1
758,011 - +0.8
758,011 - -1.1
758,038 + +1.1
758,038 + -0.8
758,060 - +0.0
758,241 + AO356_03410 0.17 -0.1
758,242 - AO356_03410 0.17 -0.5
758,261 + AO356_03410 0.18 +0.1
758,261 + AO356_03410 0.18 +0.2
758,262 - AO356_03410 0.18 +0.1
758,262 - AO356_03410 0.18 +1.2
758,262 - AO356_03410 0.18 +0.8
758,262 - AO356_03410 0.18 +0.3
758,283 - AO356_03410 0.19 -0.0
758,530 + AO356_03410 0.33 +0.6
758,531 - AO356_03410 0.33 -0.9
758,531 - AO356_03410 0.33 +0.2
758,531 - AO356_03410 0.33 +0.2
758,531 - AO356_03410 0.33 +0.3
758,563 - AO356_03410 0.35 +0.7
758,630 + AO356_03410 0.38 -0.3
758,631 - AO356_03410 0.38 +0.2
758,647 + AO356_03410 0.39 -1.5
758,737 - AO356_03410 0.44 +0.3
758,803 + AO356_03410 0.48 -0.7
758,823 + AO356_03410 0.49 +0.6
758,870 - AO356_03410 0.51 -0.1
758,881 + AO356_03410 0.52 +0.6
758,881 + AO356_03410 0.52 +0.4
758,881 + AO356_03410 0.52 +0.2
758,881 + AO356_03410 0.52 +0.0
758,881 + AO356_03410 0.52 -0.4
758,882 - AO356_03410 0.52 -1.4
758,882 - AO356_03410 0.52 -1.2
758,882 - AO356_03410 0.52 -0.3
758,884 + AO356_03410 0.52 -0.4
758,885 - AO356_03410 0.52 +1.1
758,920 + AO356_03410 0.54 -0.5
758,920 + AO356_03410 0.54 -1.0
758,921 - AO356_03410 0.54 +0.6
758,921 - AO356_03410 0.54 -0.5

Or see this region's nucleotide sequence