Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_03365

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_03360 and AO356_03365 are separated by 25 nucleotidesAO356_03365 and AO356_03370 are separated by 7 nucleotides AO356_03360: AO356_03360 - hypothetical protein, at 747,643 to 748,884 _03360 AO356_03365: AO356_03365 - UDP-N-acetylglucosamine 2-epimerase, at 748,910 to 749,974 _03365 AO356_03370: AO356_03370 - glycosyl transferase, at 749,982 to 751,088 _03370 Position (kb) 748 749 750Strain fitness (log2 ratio) -2 -1 0 1at 748.078 kb on - strand, within AO356_03360at 748.509 kb on - strand, within AO356_03360at 748.650 kb on + strand, within AO356_03360at 748.653 kb on - strand, within AO356_03360at 748.797 kb on - strandat 748.857 kb on + strandat 748.896 kb on + strandat 748.964 kb on + strandat 749.021 kb on + strand, within AO356_03365at 749.305 kb on + strand, within AO356_03365at 749.518 kb on + strand, within AO356_03365at 749.533 kb on + strand, within AO356_03365at 749.599 kb on + strand, within AO356_03365at 749.602 kb on + strand, within AO356_03365at 749.788 kb on + strand, within AO356_03365at 749.792 kb on + strand, within AO356_03365at 749.845 kb on + strand, within AO356_03365at 749.918 kb on + strandat 749.956 kb on + strandat 749.980 kb on + strandat 750.206 kb on + strand, within AO356_03370

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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748,078 - AO356_03360 0.35 -1.1
748,509 - AO356_03360 0.70 -2.4
748,650 + AO356_03360 0.81 -0.2
748,653 - AO356_03360 0.81 -0.6
748,797 - -1.1
748,857 + +0.2
748,896 + -0.9
748,964 + -2.2
749,021 + AO356_03365 0.10 -0.1
749,305 + AO356_03365 0.37 -1.4
749,518 + AO356_03365 0.57 -2.1
749,533 + AO356_03365 0.58 -1.0
749,599 + AO356_03365 0.65 +0.2
749,602 + AO356_03365 0.65 -1.4
749,788 + AO356_03365 0.82 -0.9
749,792 + AO356_03365 0.83 -0.8
749,845 + AO356_03365 0.88 -0.8
749,918 + -0.2
749,956 + -0.4
749,980 + -2.5
750,206 + AO356_03370 0.20 -0.8

Or see this region's nucleotide sequence