Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02710 and AO356_02715 overlap by 4 nucleotides AO356_02715 and AO356_02720 overlap by 4 nucleotides AO356_02720 and AO356_02725 overlap by 17 nucleotides
AO356_02710: AO356_02710 - flagellar motor switch/type III secretory pathway protein, at 593,582 to 594,511
_02710
AO356_02715: AO356_02715 - type III secretion effector protein, at 594,508 to 595,377
_02715
AO356_02720: AO356_02720 - type III secretion protein, at 595,374 to 595,829
_02720
AO356_02725: AO356_02725 - ATP synthase, at 595,813 to 597,099
_02725
Position (kb) 595
596 Strain fitness (log2 ratio) -1
0
1
2 at 594.384 kb on + strand, within AO356_02710 at 594.384 kb on + strand, within AO356_02710 at 594.384 kb on + strand, within AO356_02710 at 594.657 kb on + strand, within AO356_02715 at 594.715 kb on + strand, within AO356_02715 at 594.715 kb on + strand, within AO356_02715 at 594.716 kb on - strand, within AO356_02715 at 594.739 kb on - strand, within AO356_02715 at 594.820 kb on + strand, within AO356_02715 at 594.821 kb on - strand, within AO356_02715 at 595.113 kb on + strand, within AO356_02715 at 595.472 kb on - strand, within AO356_02720 at 595.472 kb on - strand, within AO356_02720 at 595.472 kb on - strand, within AO356_02720 at 595.472 kb on - strand, within AO356_02720 at 596.123 kb on + strand, within AO356_02725 at 596.124 kb on - strand, within AO356_02725 at 596.124 kb on - strand, within AO356_02725 at 596.202 kb on - strand, within AO356_02725 at 596.202 kb on - strand, within AO356_02725 at 596.202 kb on - strand, within AO356_02725 at 596.342 kb on + strand, within AO356_02725
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 594,384 + AO356_02710 0.86 +0.1 594,384 + AO356_02710 0.86 +0.6 594,384 + AO356_02710 0.86 +0.6 594,657 + AO356_02715 0.17 +1.2 594,715 + AO356_02715 0.24 +1.1 594,715 + AO356_02715 0.24 -0.7 594,716 - AO356_02715 0.24 +0.8 594,739 - AO356_02715 0.27 +0.5 594,820 + AO356_02715 0.36 +0.2 594,821 - AO356_02715 0.36 +0.2 595,113 + AO356_02715 0.70 -0.4 595,472 - AO356_02720 0.21 +0.7 595,472 - AO356_02720 0.21 +1.0 595,472 - AO356_02720 0.21 +2.0 595,472 - AO356_02720 0.21 -0.8 596,123 + AO356_02725 0.24 +0.9 596,124 - AO356_02725 0.24 +0.6 596,124 - AO356_02725 0.24 +0.3 596,202 - AO356_02725 0.30 -0.8 596,202 - AO356_02725 0.30 +0.2 596,202 - AO356_02725 0.30 -1.1 596,342 + AO356_02725 0.41 -0.1
Or see this region's nucleotide sequence