Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02480 and AO356_02485 are separated by 94 nucleotides AO356_02485 and AO356_02490 are separated by 76 nucleotides AO356_02490 and AO356_02495 are separated by 126 nucleotides
AO356_02480: AO356_02480 - coproporphyrinogen III oxidase, at 538,668 to 540,050
_02480
AO356_02485: AO356_02485 - transcriptional regulator, at 540,145 to 540,879
_02485
AO356_02490: AO356_02490 - adenine phosphoribosyltransferase, at 540,956 to 541,504
_02490
AO356_02495: AO356_02495 - recombination protein RecR, at 541,631 to 542,233
_02495
Position (kb) 540
541 Strain fitness (log2 ratio) -2
-1
0
1
2 at 539.313 kb on + strand, within AO356_02480 at 539.314 kb on - strand, within AO356_02480 at 539.404 kb on - strand, within AO356_02480 at 539.404 kb on - strand, within AO356_02480 at 539.529 kb on + strand, within AO356_02480 at 539.530 kb on - strand, within AO356_02480 at 539.530 kb on - strand, within AO356_02480 at 539.530 kb on - strand, within AO356_02480 at 539.616 kb on + strand, within AO356_02480 at 539.616 kb on + strand, within AO356_02480 at 539.617 kb on - strand, within AO356_02480 at 539.617 kb on - strand, within AO356_02480 at 539.617 kb on - strand, within AO356_02480 at 539.617 kb on - strand, within AO356_02480 at 539.685 kb on + strand, within AO356_02480 at 539.685 kb on + strand, within AO356_02480 at 539.716 kb on - strand, within AO356_02480 at 539.874 kb on + strand, within AO356_02480 at 540.006 kb on + strand at 540.006 kb on + strand at 540.006 kb on + strand at 540.007 kb on - strand at 540.007 kb on - strand at 540.007 kb on - strand at 540.044 kb on + strand at 540.093 kb on - strand at 540.115 kb on + strand at 540.116 kb on - strand at 540.116 kb on - strand at 540.116 kb on - strand at 540.116 kb on - strand at 540.366 kb on + strand, within AO356_02485 at 540.367 kb on - strand, within AO356_02485 at 540.530 kb on + strand, within AO356_02485 at 540.531 kb on - strand, within AO356_02485 at 540.606 kb on - strand, within AO356_02485 at 540.736 kb on + strand, within AO356_02485 at 540.793 kb on + strand, within AO356_02485 at 540.918 kb on + strand at 540.918 kb on + strand at 540.918 kb on + strand at 540.918 kb on + strand at 540.918 kb on + strand at 540.919 kb on - strand at 540.919 kb on - strand at 541.100 kb on + strand, within AO356_02490 at 541.100 kb on + strand, within AO356_02490 at 541.101 kb on - strand, within AO356_02490 at 541.173 kb on - strand, within AO356_02490 at 541.230 kb on + strand, within AO356_02490 at 541.230 kb on + strand, within AO356_02490 at 541.230 kb on + strand, within AO356_02490 at 541.231 kb on - strand, within AO356_02490 at 541.231 kb on - strand, within AO356_02490 at 541.502 kb on + strand at 541.502 kb on + strand at 541.557 kb on + strand at 541.632 kb on + strand at 541.770 kb on + strand, within AO356_02495 at 541.770 kb on + strand, within AO356_02495 at 541.771 kb on - strand, within AO356_02495
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 539,313 + AO356_02480 0.47 +1.1 539,314 - AO356_02480 0.47 +0.3 539,404 - AO356_02480 0.53 -0.2 539,404 - AO356_02480 0.53 -0.8 539,529 + AO356_02480 0.62 -0.3 539,530 - AO356_02480 0.62 -0.4 539,530 - AO356_02480 0.62 -0.9 539,530 - AO356_02480 0.62 +2.0 539,616 + AO356_02480 0.69 +0.8 539,616 + AO356_02480 0.69 +0.5 539,617 - AO356_02480 0.69 +0.3 539,617 - AO356_02480 0.69 +1.0 539,617 - AO356_02480 0.69 -0.9 539,617 - AO356_02480 0.69 -0.4 539,685 + AO356_02480 0.74 -0.5 539,685 + AO356_02480 0.74 +0.4 539,716 - AO356_02480 0.76 -1.3 539,874 + AO356_02480 0.87 +0.4 540,006 + -0.2 540,006 + -0.4 540,006 + +0.1 540,007 - -0.4 540,007 - +0.2 540,007 - -1.0 540,044 + -0.1 540,093 - +1.8 540,115 + +1.2 540,116 - +1.0 540,116 - +1.2 540,116 - +1.2 540,116 - +1.2 540,366 + AO356_02485 0.30 +1.0 540,367 - AO356_02485 0.30 +0.6 540,530 + AO356_02485 0.52 -0.4 540,531 - AO356_02485 0.53 +0.7 540,606 - AO356_02485 0.63 +0.7 540,736 + AO356_02485 0.80 +1.4 540,793 + AO356_02485 0.88 -0.5 540,918 + +1.1 540,918 + +0.3 540,918 + +0.2 540,918 + -0.3 540,918 + +0.1 540,919 - +0.4 540,919 - +0.1 541,100 + AO356_02490 0.26 -0.4 541,100 + AO356_02490 0.26 -0.4 541,101 - AO356_02490 0.26 +0.6 541,173 - AO356_02490 0.40 +1.2 541,230 + AO356_02490 0.50 -0.6 541,230 + AO356_02490 0.50 -2.6 541,230 + AO356_02490 0.50 +1.2 541,231 - AO356_02490 0.50 +0.3 541,231 - AO356_02490 0.50 +0.4 541,502 + -0.1 541,502 + +1.2 541,557 + +1.6 541,632 + +0.1 541,770 + AO356_02495 0.23 +0.6 541,770 + AO356_02495 0.23 +0.6 541,771 - AO356_02495 0.23 +1.2
Or see this region's nucleotide sequence