Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01995 and AO356_02000 overlap by 4 nucleotides AO356_02000 and AO356_02005 overlap by 4 nucleotides AO356_02005 and AO356_02010 overlap by 4 nucleotides AO356_02010 and AO356_02015 are separated by 96 nucleotides
AO356_01995: AO356_01995 - holin, at 441,519 to 441,833
_01995
AO356_02000: AO356_02000 - peptidoglycan-binding protein, at 441,830 to 442,672
_02000
AO356_02005: AO356_02005 - hypothetical protein, at 442,669 to 442,875
_02005
AO356_02010: AO356_02010 - peptidase, at 442,872 to 443,315
_02010
AO356_02015: AO356_02015 - phage tail protein, at 443,412 to 443,888
_02015
Position (kb) 442
443 Strain fitness (log2 ratio) -1
0
1 at 441.685 kb on + strand, within AO356_01995 at 441.718 kb on + strand, within AO356_01995 at 441.718 kb on + strand, within AO356_01995 at 441.719 kb on - strand, within AO356_01995 at 441.719 kb on - strand, within AO356_01995 at 441.719 kb on - strand, within AO356_01995 at 441.719 kb on - strand, within AO356_01995 at 441.719 kb on - strand, within AO356_01995 at 441.719 kb on - strand, within AO356_01995 at 441.820 kb on + strand at 441.820 kb on + strand at 441.821 kb on - strand at 441.821 kb on - strand at 441.821 kb on - strand at 441.829 kb on + strand at 441.829 kb on + strand at 441.830 kb on - strand at 441.830 kb on - strand at 441.830 kb on - strand at 441.830 kb on - strand at 441.830 kb on - strand at 441.830 kb on - strand at 441.830 kb on - strand at 441.926 kb on + strand, within AO356_02000 at 441.926 kb on + strand, within AO356_02000 at 441.927 kb on - strand, within AO356_02000 at 441.927 kb on - strand, within AO356_02000 at 441.959 kb on + strand, within AO356_02000 at 441.959 kb on + strand, within AO356_02000 at 441.960 kb on - strand, within AO356_02000 at 442.090 kb on - strand, within AO356_02000 at 442.106 kb on + strand, within AO356_02000 at 442.107 kb on - strand, within AO356_02000 at 442.190 kb on + strand, within AO356_02000 at 442.190 kb on + strand, within AO356_02000 at 442.430 kb on + strand, within AO356_02000 at 442.546 kb on + strand, within AO356_02000 at 442.571 kb on + strand, within AO356_02000 at 442.571 kb on + strand, within AO356_02000 at 442.571 kb on + strand, within AO356_02000 at 442.601 kb on + strand at 442.601 kb on + strand at 442.602 kb on - strand at 442.625 kb on + strand at 442.626 kb on - strand at 442.626 kb on - strand at 442.679 kb on + strand at 442.752 kb on + strand, within AO356_02005 at 442.752 kb on + strand, within AO356_02005 at 442.753 kb on - strand, within AO356_02005 at 443.389 kb on + strand at 443.390 kb on - strand at 443.390 kb on - strand at 443.548 kb on - strand, within AO356_02015 at 443.560 kb on + strand, within AO356_02015 at 443.561 kb on - strand, within AO356_02015 at 443.581 kb on - strand, within AO356_02015 at 443.728 kb on + strand, within AO356_02015 at 443.728 kb on + strand, within AO356_02015 at 443.728 kb on + strand, within AO356_02015 at 443.728 kb on + strand, within AO356_02015 at 443.729 kb on - strand, within AO356_02015 at 443.729 kb on - strand, within AO356_02015 at 443.729 kb on - strand, within AO356_02015 at 443.780 kb on + strand, within AO356_02015 at 443.807 kb on + strand, within AO356_02015 at 443.807 kb on + strand, within AO356_02015 at 443.807 kb on + strand, within AO356_02015 at 443.808 kb on - strand, within AO356_02015 at 443.808 kb on - strand, within AO356_02015 at 443.808 kb on - strand, within AO356_02015 at 443.808 kb on - strand, within AO356_02015 at 443.808 kb on - strand, within AO356_02015 at 443.808 kb on - strand, within AO356_02015 at 443.808 kb on - strand, within AO356_02015 at 443.843 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 441,685 + AO356_01995 0.53 -0.2 441,718 + AO356_01995 0.63 +0.3 441,718 + AO356_01995 0.63 +0.1 441,719 - AO356_01995 0.63 -0.8 441,719 - AO356_01995 0.63 +1.7 441,719 - AO356_01995 0.63 -1.3 441,719 - AO356_01995 0.63 +0.4 441,719 - AO356_01995 0.63 +0.6 441,719 - AO356_01995 0.63 +0.5 441,820 + -0.1 441,820 + -0.1 441,821 - +0.3 441,821 - -1.1 441,821 - +1.5 441,829 + +0.3 441,829 + -0.1 441,830 - -0.1 441,830 - +0.1 441,830 - -0.1 441,830 - -0.4 441,830 - +0.8 441,830 - +0.4 441,830 - -0.6 441,926 + AO356_02000 0.11 -0.4 441,926 + AO356_02000 0.11 -0.2 441,927 - AO356_02000 0.12 -0.5 441,927 - AO356_02000 0.12 +0.3 441,959 + AO356_02000 0.15 +1.0 441,959 + AO356_02000 0.15 +0.8 441,960 - AO356_02000 0.15 -0.6 442,090 - AO356_02000 0.31 +0.5 442,106 + AO356_02000 0.33 -0.1 442,107 - AO356_02000 0.33 -0.4 442,190 + AO356_02000 0.43 +0.3 442,190 + AO356_02000 0.43 -0.2 442,430 + AO356_02000 0.71 -0.4 442,546 + AO356_02000 0.85 -0.6 442,571 + AO356_02000 0.88 -0.6 442,571 + AO356_02000 0.88 -0.6 442,571 + AO356_02000 0.88 -1.4 442,601 + +1.2 442,601 + -1.1 442,602 - -0.3 442,625 + -0.3 442,626 - -0.8 442,626 - +0.9 442,679 + +1.0 442,752 + AO356_02005 0.40 +0.6 442,752 + AO356_02005 0.40 +0.6 442,753 - AO356_02005 0.41 +0.3 443,389 + -0.6 443,390 - -0.0 443,390 - -0.4 443,548 - AO356_02015 0.29 +0.2 443,560 + AO356_02015 0.31 +0.1 443,561 - AO356_02015 0.31 -0.4 443,581 - AO356_02015 0.35 +0.7 443,728 + AO356_02015 0.66 +1.0 443,728 + AO356_02015 0.66 -0.1 443,728 + AO356_02015 0.66 +0.0 443,728 + AO356_02015 0.66 +0.9 443,729 - AO356_02015 0.66 +0.6 443,729 - AO356_02015 0.66 +0.9 443,729 - AO356_02015 0.66 -0.1 443,780 + AO356_02015 0.77 -0.4 443,807 + AO356_02015 0.83 +0.4 443,807 + AO356_02015 0.83 +0.8 443,807 + AO356_02015 0.83 +0.8 443,808 - AO356_02015 0.83 -0.0 443,808 - AO356_02015 0.83 +0.5 443,808 - AO356_02015 0.83 -0.0 443,808 - AO356_02015 0.83 -0.1 443,808 - AO356_02015 0.83 +0.6 443,808 - AO356_02015 0.83 +0.2 443,808 - AO356_02015 0.83 -0.5 443,843 - -0.5
Or see this region's nucleotide sequence