Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01585 and AO356_01590 are separated by 13 nucleotides AO356_01590 and AO356_01595 overlap by 4 nucleotides
AO356_01585: AO356_01585 - 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) <small>(from data)</small>, at 357,745 to 359,352
_01585
AO356_01590: AO356_01590 - Methylglutaconyl-CoA hydratase (EC 4.2.1.18) <small>(from data)</small>, at 359,366 to 360,187
_01590
AO356_01595: AO356_01595 - 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) <small>(from data)</small>, at 360,184 to 362,133
_01595
Position (kb) 359
360
361 Strain fitness (log2 ratio) -1
0
1
2 at 358.487 kb on - strand, within AO356_01585 at 358.487 kb on - strand, within AO356_01585 at 358.487 kb on - strand, within AO356_01585 at 358.487 kb on - strand, within AO356_01585 at 358.594 kb on + strand, within AO356_01585 at 358.612 kb on + strand, within AO356_01585 at 358.612 kb on + strand, within AO356_01585 at 358.612 kb on + strand, within AO356_01585 at 358.613 kb on - strand, within AO356_01585 at 358.613 kb on - strand, within AO356_01585 at 358.897 kb on + strand, within AO356_01585 at 358.897 kb on + strand, within AO356_01585 at 358.898 kb on - strand, within AO356_01585 at 359.005 kb on - strand, within AO356_01585 at 359.008 kb on + strand, within AO356_01585 at 359.009 kb on - strand, within AO356_01585 at 359.029 kb on + strand, within AO356_01585 at 359.197 kb on + strand at 359.197 kb on + strand at 359.197 kb on + strand at 359.219 kb on - strand at 359.219 kb on - strand at 359.221 kb on + strand at 359.221 kb on + strand at 359.221 kb on + strand at 359.222 kb on - strand at 359.222 kb on - strand at 359.279 kb on + strand at 359.280 kb on - strand at 359.280 kb on - strand at 359.351 kb on - strand at 359.351 kb on - strand at 359.351 kb on - strand at 359.513 kb on - strand, within AO356_01590 at 359.603 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.648 kb on + strand, within AO356_01590 at 359.649 kb on - strand, within AO356_01590 at 359.649 kb on - strand, within AO356_01590 at 359.722 kb on + strand, within AO356_01590 at 359.722 kb on + strand, within AO356_01590 at 359.723 kb on - strand, within AO356_01590 at 359.974 kb on - strand, within AO356_01590 at 359.974 kb on - strand, within AO356_01590 at 360.060 kb on - strand, within AO356_01590 at 360.164 kb on - strand at 360.287 kb on + strand at 360.373 kb on + strand at 360.373 kb on + strand at 360.374 kb on - strand at 360.374 kb on - strand at 360.799 kb on + strand, within AO356_01595 at 360.862 kb on + strand, within AO356_01595 at 360.997 kb on + strand, within AO356_01595 at 360.997 kb on + strand, within AO356_01595 at 360.998 kb on - strand, within AO356_01595
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 358,487 - AO356_01585 0.46 -0.3 358,487 - AO356_01585 0.46 +0.8 358,487 - AO356_01585 0.46 -0.8 358,487 - AO356_01585 0.46 +0.2 358,594 + AO356_01585 0.53 -0.4 358,612 + AO356_01585 0.54 -1.7 358,612 + AO356_01585 0.54 -1.2 358,612 + AO356_01585 0.54 +0.2 358,613 - AO356_01585 0.54 +0.0 358,613 - AO356_01585 0.54 -1.4 358,897 + AO356_01585 0.72 +0.1 358,897 + AO356_01585 0.72 -0.5 358,898 - AO356_01585 0.72 +0.2 359,005 - AO356_01585 0.78 -0.3 359,008 + AO356_01585 0.79 -0.0 359,009 - AO356_01585 0.79 +0.0 359,029 + AO356_01585 0.80 +0.4 359,197 + +0.4 359,197 + +0.2 359,197 + -1.4 359,219 - -1.0 359,219 - +0.9 359,221 + +0.5 359,221 + -0.2 359,221 + -1.4 359,222 - +1.3 359,222 - -0.7 359,279 + -0.3 359,280 - +0.4 359,280 - -0.3 359,351 - +0.1 359,351 - +0.5 359,351 - -0.5 359,513 - AO356_01590 0.18 -0.4 359,603 + AO356_01590 0.29 +1.7 359,648 + AO356_01590 0.34 +1.4 359,648 + AO356_01590 0.34 -0.4 359,648 + AO356_01590 0.34 +1.0 359,648 + AO356_01590 0.34 +0.5 359,648 + AO356_01590 0.34 +1.3 359,648 + AO356_01590 0.34 -0.4 359,648 + AO356_01590 0.34 -0.1 359,649 - AO356_01590 0.34 -1.6 359,649 - AO356_01590 0.34 +1.3 359,722 + AO356_01590 0.43 +1.5 359,722 + AO356_01590 0.43 +1.2 359,723 - AO356_01590 0.43 -0.4 359,974 - AO356_01590 0.74 +0.9 359,974 - AO356_01590 0.74 -0.2 360,060 - AO356_01590 0.84 +0.2 360,164 - +0.8 360,287 + +0.5 360,373 + -0.5 360,373 + -0.2 360,374 - -0.4 360,374 - +2.3 360,799 + AO356_01595 0.32 +0.7 360,862 + AO356_01595 0.35 -1.2 360,997 + AO356_01595 0.42 -0.3 360,997 + AO356_01595 0.42 +1.4 360,998 - AO356_01595 0.42 -0.3
Or see this region's nucleotide sequence