Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00865 and AO356_00870 are separated by 316 nucleotides AO356_00870 and AO356_00875 are separated by 90 nucleotides AO356_00875 and AO356_00880 overlap by 20 nucleotides AO356_00880 and AO356_00885 are separated by 3 nucleotides
AO356_00865: AO356_00865 - DNA helicase, at 197,925 to 204,551
_00865
AO356_00870: AO356_00870 - tRNA-Pro, at 204,868 to 204,944
_00870
AO356_00875: AO356_00875 - MerR family transcriptional regulator, at 205,035 to 205,391
_00875
AO356_00880: AO356_00880 - integration host factor subunit alpha, at 205,372 to 205,674
_00880
AO356_00885: AO356_00885 - phenylalanine--tRNA ligase subunit beta, at 205,678 to 208,056
_00885
Position (kb)
204
205 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 203.920 kb on + strand at 203.995 kb on + strand at 203.996 kb on - strand at 204.002 kb on + strand at 204.002 kb on + strand at 204.002 kb on + strand at 204.003 kb on - strand at 204.003 kb on - strand at 204.023 kb on + strand at 204.031 kb on - strand at 204.031 kb on - strand at 204.102 kb on - strand at 204.102 kb on - strand at 204.102 kb on - strand at 204.102 kb on - strand at 204.108 kb on + strand at 204.108 kb on + strand at 204.108 kb on + strand at 204.110 kb on + strand at 204.111 kb on - strand at 204.111 kb on - strand at 204.151 kb on - strand at 204.200 kb on + strand at 204.224 kb on + strand at 204.225 kb on - strand at 204.225 kb on - strand at 204.276 kb on + strand at 204.276 kb on + strand at 204.276 kb on + strand at 204.277 kb on - strand at 204.294 kb on + strand at 204.294 kb on + strand at 204.295 kb on - strand at 204.295 kb on - strand at 204.347 kb on + strand at 204.347 kb on + strand at 204.347 kb on + strand at 204.348 kb on - strand at 204.348 kb on - strand at 204.348 kb on - strand at 204.351 kb on + strand at 204.351 kb on + strand at 204.351 kb on + strand at 204.351 kb on + strand at 204.352 kb on - strand at 204.429 kb on + strand at 204.430 kb on - strand at 204.430 kb on - strand at 204.432 kb on + strand at 204.432 kb on + strand at 204.433 kb on - strand at 204.433 kb on - strand at 204.495 kb on + strand at 204.496 kb on - strand at 204.496 kb on - strand at 204.496 kb on - strand at 204.503 kb on + strand at 204.572 kb on - strand at 204.657 kb on - strand at 204.657 kb on - strand at 204.659 kb on + strand at 204.659 kb on + strand at 204.659 kb on + strand at 204.659 kb on + strand at 204.659 kb on + strand at 204.660 kb on - strand at 204.667 kb on + strand at 204.667 kb on + strand at 204.667 kb on + strand at 204.668 kb on - strand at 204.670 kb on + strand at 204.670 kb on + strand at 204.671 kb on - strand at 204.671 kb on - strand at 204.671 kb on - strand at 204.710 kb on + strand at 204.740 kb on + strand at 204.823 kb on + strand at 204.865 kb on - strand at 204.867 kb on - strand at 204.915 kb on + strand, within AO356_00870 at 204.916 kb on - strand, within AO356_00870 at 204.916 kb on - strand, within AO356_00870 at 205.018 kb on + strand at 205.023 kb on - strand at 205.100 kb on - strand, within AO356_00875 at 205.100 kb on - strand, within AO356_00875 at 205.109 kb on + strand, within AO356_00875 at 205.110 kb on - strand, within AO356_00875 at 205.110 kb on - strand, within AO356_00875 at 205.222 kb on + strand, within AO356_00875 at 205.223 kb on - strand, within AO356_00875 at 205.225 kb on + strand, within AO356_00875 at 205.226 kb on - strand, within AO356_00875 at 205.226 kb on - strand, within AO356_00875 at 205.303 kb on - strand, within AO356_00875 at 205.303 kb on - strand, within AO356_00875 at 205.391 kb on + strand at 205.391 kb on + strand at 205.392 kb on - strand at 205.579 kb on + strand, within AO356_00880 at 205.635 kb on - strand, within AO356_00880 at 205.635 kb on - strand, within AO356_00880 at 205.674 kb on + strand at 205.674 kb on + strand at 205.675 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 203,920 + +0.8 203,995 + +0.4 203,996 - +0.4 204,002 + -0.4 204,002 + -2.2 204,002 + +1.2 204,003 - +1.0 204,003 - +1.0 204,023 + +0.2 204,031 - -0.1 204,031 - +0.1 204,102 - -0.0 204,102 - -1.2 204,102 - +1.4 204,102 - -0.0 204,108 + -0.5 204,108 + +0.6 204,108 + +0.2 204,110 + +0.1 204,111 - +0.7 204,111 - +0.0 204,151 - +0.9 204,200 + -0.2 204,224 + +0.6 204,225 - -0.1 204,225 - +0.3 204,276 + -0.3 204,276 + -0.8 204,276 + +0.1 204,277 - -1.2 204,294 + +0.0 204,294 + -0.5 204,295 - +0.4 204,295 - +1.1 204,347 + -0.0 204,347 + -0.3 204,347 + +0.2 204,348 - -1.0 204,348 - +0.4 204,348 - -0.6 204,351 + -0.5 204,351 + +0.0 204,351 + +0.4 204,351 + +0.5 204,352 - -0.0 204,429 + +0.2 204,430 - +0.0 204,430 - -1.2 204,432 + +0.2 204,432 + +0.7 204,433 - -0.8 204,433 - -0.3 204,495 + +0.1 204,496 - +0.2 204,496 - -1.1 204,496 - +0.1 204,503 + +0.5 204,572 - +0.8 204,657 - -0.0 204,657 - +1.1 204,659 + -1.1 204,659 + +0.1 204,659 + +0.3 204,659 + -0.9 204,659 + +0.3 204,660 - -0.6 204,667 + -0.0 204,667 + +0.3 204,667 + +0.7 204,668 - -0.1 204,670 + +0.5 204,670 + -0.3 204,671 - +0.7 204,671 - -0.2 204,671 - +1.9 204,710 + -0.3 204,740 + -0.6 204,823 + +0.9 204,865 - +0.0 204,867 - +0.5 204,915 + AO356_00870 0.61 -0.6 204,916 - AO356_00870 0.62 +0.1 204,916 - AO356_00870 0.62 -1.3 205,018 + -0.5 205,023 - -2.2 205,100 - AO356_00875 0.18 +2.1 205,100 - AO356_00875 0.18 +0.5 205,109 + AO356_00875 0.21 +0.6 205,110 - AO356_00875 0.21 -0.2 205,110 - AO356_00875 0.21 -1.2 205,222 + AO356_00875 0.52 +0.9 205,223 - AO356_00875 0.53 +0.8 205,225 + AO356_00875 0.53 -1.2 205,226 - AO356_00875 0.54 -0.5 205,226 - AO356_00875 0.54 +0.7 205,303 - AO356_00875 0.75 -0.1 205,303 - AO356_00875 0.75 +0.2 205,391 + -0.1 205,391 + +0.9 205,392 - +1.4 205,579 + AO356_00880 0.68 +0.6 205,635 - AO356_00880 0.87 +1.5 205,635 - AO356_00880 0.87 +0.1 205,674 + +0.2 205,674 + -2.1 205,675 - +0.7
Or see this region's nucleotide sequence