Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00660 and AO356_00665 are separated by 2 nucleotides AO356_00665 and AO356_00670 are separated by 21 nucleotides
AO356_00660: AO356_00660 - 5-carboxymethyl-2-hydroxymuconate isomerase, at 141,876 to 142,727
_00660
AO356_00665: AO356_00665 - IclR family transcriptional regulator, at 142,730 to 143,551
_00665
AO356_00670: AO356_00670 - 3-(3-hydroxyphenyl)propionate hydroxylase, at 143,573 to 145,219
_00670
Position (kb)
142
143
144 Strain fitness (log2 ratio)
-1
0
1
2 at 141.751 kb on + strand at 141.751 kb on + strand at 141.751 kb on + strand at 141.752 kb on - strand at 141.752 kb on - strand at 141.834 kb on - strand at 141.876 kb on - strand at 141.915 kb on + strand at 141.915 kb on + strand at 142.122 kb on + strand, within AO356_00660 at 142.123 kb on - strand, within AO356_00660 at 142.179 kb on - strand, within AO356_00660 at 142.321 kb on - strand, within AO356_00660 at 142.321 kb on - strand, within AO356_00660 at 142.321 kb on - strand, within AO356_00660 at 142.342 kb on - strand, within AO356_00660 at 142.726 kb on - strand at 142.726 kb on - strand at 142.895 kb on + strand, within AO356_00665 at 142.902 kb on - strand, within AO356_00665 at 142.902 kb on - strand, within AO356_00665 at 143.330 kb on + strand, within AO356_00665 at 143.330 kb on + strand, within AO356_00665 at 143.568 kb on + strand at 143.752 kb on - strand, within AO356_00670 at 143.813 kb on + strand, within AO356_00670 at 143.813 kb on + strand, within AO356_00670 at 143.813 kb on + strand, within AO356_00670 at 143.814 kb on - strand, within AO356_00670 at 143.814 kb on - strand, within AO356_00670 at 143.870 kb on + strand, within AO356_00670 at 143.870 kb on + strand, within AO356_00670 at 143.870 kb on + strand, within AO356_00670 at 144.006 kb on + strand, within AO356_00670 at 144.059 kb on + strand, within AO356_00670 at 144.059 kb on + strand, within AO356_00670 at 144.197 kb on + strand, within AO356_00670 at 144.198 kb on - strand, within AO356_00670 at 144.375 kb on - strand, within AO356_00670 at 144.375 kb on - strand, within AO356_00670
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 141,751 + -0.2 141,751 + -1.1 141,751 + -0.7 141,752 - +0.5 141,752 - +0.3 141,834 - +0.7 141,876 - -0.4 141,915 + -1.5 141,915 + +0.2 142,122 + AO356_00660 0.29 -0.4 142,123 - AO356_00660 0.29 +0.1 142,179 - AO356_00660 0.36 -0.0 142,321 - AO356_00660 0.52 -0.9 142,321 - AO356_00660 0.52 -0.0 142,321 - AO356_00660 0.52 +2.1 142,342 - AO356_00660 0.55 +1.5 142,726 - -1.0 142,726 - +2.4 142,895 + AO356_00665 0.20 -1.0 142,902 - AO356_00665 0.21 +0.2 142,902 - AO356_00665 0.21 +1.1 143,330 + AO356_00665 0.73 -1.6 143,330 + AO356_00665 0.73 -1.4 143,568 + +0.2 143,752 - AO356_00670 0.11 -0.7 143,813 + AO356_00670 0.15 +0.7 143,813 + AO356_00670 0.15 -1.0 143,813 + AO356_00670 0.15 -0.1 143,814 - AO356_00670 0.15 +0.5 143,814 - AO356_00670 0.15 -0.4 143,870 + AO356_00670 0.18 +0.7 143,870 + AO356_00670 0.18 -0.0 143,870 + AO356_00670 0.18 +0.2 144,006 + AO356_00670 0.26 +1.7 144,059 + AO356_00670 0.30 -0.1 144,059 + AO356_00670 0.30 +0.2 144,197 + AO356_00670 0.38 -0.5 144,198 - AO356_00670 0.38 -0.2 144,375 - AO356_00670 0.49 +0.9 144,375 - AO356_00670 0.49 -0.4
Or see this region's nucleotide sequence