Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_00120 and AO356_00125 are separated by 43 nucleotides AO356_00125 and AO356_00130 are separated by 208 nucleotides AO356_00130 and AO356_00135 are separated by 899 nucleotides
AO356_00120: AO356_00120 - DNA topoisomerase III, at 22,824 to 24,791
_00120
AO356_00125: AO356_00125 - hypothetical protein, at 24,835 to 25,092
_00125
AO356_00130: AO356_00130 - XRE family transcriptional regulator, at 25,301 to 25,642
_00130
AO356_00135: AO356_00135 - hypothetical protein, at 26,542 to 27,123
_00135
Position (kb)
25
26 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 24.452 kb on - strand, within AO356_00120 at 24.455 kb on - strand, within AO356_00120 at 24.635 kb on + strand at 24.635 kb on + strand at 24.635 kb on + strand at 24.635 kb on + strand at 24.636 kb on - strand at 24.636 kb on - strand at 24.636 kb on - strand at 24.640 kb on + strand at 24.738 kb on + strand at 24.749 kb on + strand at 24.750 kb on - strand at 24.750 kb on - strand at 24.810 kb on + strand at 24.810 kb on + strand at 24.811 kb on - strand at 24.829 kb on + strand at 24.830 kb on - strand at 24.830 kb on - strand at 24.830 kb on - strand at 24.830 kb on - strand at 24.877 kb on + strand, within AO356_00125 at 24.878 kb on - strand, within AO356_00125 at 24.925 kb on + strand, within AO356_00125 at 24.925 kb on + strand, within AO356_00125 at 25.186 kb on + strand at 25.186 kb on + strand at 25.186 kb on + strand at 25.186 kb on + strand at 25.187 kb on - strand at 25.187 kb on - strand at 25.194 kb on + strand at 25.194 kb on + strand at 25.194 kb on + strand at 25.195 kb on - strand at 25.195 kb on - strand at 25.208 kb on + strand at 25.209 kb on - strand at 25.209 kb on - strand at 25.309 kb on + strand at 25.309 kb on + strand at 25.310 kb on - strand at 25.310 kb on - strand at 25.310 kb on - strand at 25.366 kb on + strand, within AO356_00130 at 25.367 kb on - strand, within AO356_00130 at 25.474 kb on - strand, within AO356_00130 at 25.481 kb on - strand, within AO356_00130 at 25.646 kb on + strand at 25.646 kb on + strand at 25.646 kb on + strand at 25.646 kb on + strand at 25.646 kb on + strand at 25.646 kb on + strand at 25.719 kb on + strand at 25.719 kb on + strand at 25.719 kb on + strand at 25.720 kb on - strand at 25.720 kb on - strand at 25.908 kb on + strand at 25.908 kb on + strand at 26.066 kb on + strand at 26.066 kb on + strand at 26.066 kb on + strand at 26.066 kb on + strand at 26.066 kb on + strand at 26.066 kb on + strand at 26.066 kb on + strand at 26.067 kb on - strand at 26.067 kb on - strand at 26.067 kb on - strand at 26.067 kb on - strand at 26.067 kb on - strand at 26.067 kb on - strand at 26.067 kb on - strand at 26.067 kb on - strand at 26.081 kb on - strand at 26.133 kb on - strand at 26.144 kb on + strand at 26.144 kb on + strand at 26.145 kb on - strand at 26.155 kb on + strand at 26.190 kb on - strand at 26.200 kb on + strand at 26.200 kb on + strand at 26.201 kb on - strand at 26.201 kb on - strand at 26.202 kb on + strand at 26.202 kb on + strand at 26.203 kb on - strand at 26.203 kb on - strand at 26.203 kb on - strand at 26.203 kb on - strand at 26.203 kb on - strand at 26.244 kb on + strand at 26.244 kb on + strand at 26.264 kb on - strand at 26.347 kb on - strand at 26.347 kb on - strand at 26.349 kb on + strand at 26.350 kb on - strand at 26.578 kb on + strand at 26.578 kb on + strand at 26.578 kb on + strand at 26.630 kb on + strand, within AO356_00135 at 26.631 kb on - strand, within AO356_00135 at 26.631 kb on - strand, within AO356_00135
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 24,452 - AO356_00120 0.83 -1.5 24,455 - AO356_00120 0.83 -1.0 24,635 + -0.3 24,635 + -0.5 24,635 + -0.7 24,635 + -0.4 24,636 - -0.5 24,636 - -0.2 24,636 - +0.8 24,640 + +0.4 24,738 + -0.2 24,749 + -1.1 24,750 - +0.2 24,750 - +0.5 24,810 + +0.7 24,810 + -0.6 24,811 - +0.0 24,829 + -0.1 24,830 - +0.1 24,830 - -0.6 24,830 - -0.5 24,830 - +1.2 24,877 + AO356_00125 0.16 +0.3 24,878 - AO356_00125 0.17 +1.4 24,925 + AO356_00125 0.35 +0.6 24,925 + AO356_00125 0.35 -0.5 25,186 + -1.5 25,186 + -0.0 25,186 + -0.9 25,186 + +0.4 25,187 - +0.1 25,187 - -0.5 25,194 + +1.5 25,194 + -0.2 25,194 + -0.8 25,195 - +0.4 25,195 - +1.5 25,208 + +0.1 25,209 - +1.4 25,209 - +0.4 25,309 + -0.5 25,309 + +0.3 25,310 - +0.4 25,310 - +0.3 25,310 - +0.1 25,366 + AO356_00130 0.19 +0.3 25,367 - AO356_00130 0.19 +0.7 25,474 - AO356_00130 0.51 +0.6 25,481 - AO356_00130 0.53 +0.9 25,646 + -0.3 25,646 + +0.1 25,646 + +0.2 25,646 + -1.0 25,646 + +0.7 25,646 + +0.7 25,719 + -0.1 25,719 + -0.2 25,719 + +1.0 25,720 - +0.7 25,720 - +1.2 25,908 + -0.2 25,908 + +0.1 26,066 + -0.2 26,066 + +0.2 26,066 + +0.1 26,066 + +0.1 26,066 + +0.1 26,066 + -1.0 26,066 + +3.2 26,067 - -0.7 26,067 - -0.1 26,067 - +0.7 26,067 - +1.9 26,067 - +1.0 26,067 - +0.4 26,067 - -0.1 26,067 - +1.1 26,081 - -0.6 26,133 - +0.3 26,144 + +0.3 26,144 + +0.3 26,145 - -1.5 26,155 + -0.0 26,190 - -0.7 26,200 + -2.7 26,200 + +0.9 26,201 - +0.9 26,201 - +0.1 26,202 + -0.4 26,202 + -1.1 26,203 - +1.1 26,203 - -0.4 26,203 - +0.9 26,203 - +0.7 26,203 - -0.7 26,244 + -0.4 26,244 + +0.2 26,264 - +1.2 26,347 - -1.2 26,347 - -1.1 26,349 + -0.7 26,350 - -0.6 26,578 + -1.0 26,578 + +0.4 26,578 + +0.3 26,630 + AO356_00135 0.15 +0.1 26,631 - AO356_00135 0.15 -0.1 26,631 - AO356_00135 0.15 +0.9
Or see this region's nucleotide sequence