Strain Fitness in Sinorhizobium meliloti 1021 around SMc04307

Experiment: Paraquat dichloride 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.05 mg/ml
2,123,078	+				+0.5
2,123,078	+				+0.2
2,123,079	-				+0.0
2,123,312	+				+0.4
2,123,312	+				+0.2
2,123,313	-				-0.9
2,123,362	-		SMc04306	0.14	-0.5
2,123,500	+		SMc04306	0.31	-0.5
2,123,501	-		SMc04306	0.31	+0.0
2,123,501	-		SMc04306	0.31	-0.7
2,123,501	-		SMc04306	0.31	+0.3
2,123,557	+		SMc04306	0.38	+1.5
2,123,557	+		SMc04306	0.38	-0.5
2,124,166	+				+0.1
2,124,166	+				+0.1
2,124,167	-				-0.2
2,124,291	+		SMc04307	0.10	-0.4
2,124,291	+		SMc04307	0.10	+0.1
2,124,291	+		SMc04307	0.10	+1.5
2,124,292	-		SMc04307	0.10	+0.4
2,124,292	-		SMc04307	0.10	+1.6
2,124,292	-		SMc04307	0.10	-0.9
2,124,314	+		SMc04307	0.11	-0.2
2,124,315	-		SMc04307	0.12	-0.9
2,124,315	-		SMc04307	0.12	-0.3
2,124,315	-		SMc04307	0.12	-0.9
2,124,408	+		SMc04307	0.16	-0.2
2,124,408	+		SMc04307	0.16	-0.8
2,124,409	-		SMc04307	0.16	-0.2
2,124,409	-		SMc04307	0.16	-1.1
2,124,409	-		SMc04307	0.16	-1.3
2,124,409	-		SMc04307	0.16	+1.3
2,124,409	-		SMc04307	0.16	-1.4
2,124,409	-		SMc04307	0.16	+0.6
2,124,409	-		SMc04307	0.16	+0.3
2,124,409	-		SMc04307	0.16	-0.1
2,124,414	+		SMc04307	0.16	+0.6
2,124,485	+		SMc04307	0.19	-0.1
2,124,510	+		SMc04307	0.20	-0.4
2,124,765	+		SMc04307	0.32	+0.1
2,124,766	-		SMc04307	0.32	-0.6
2,124,826	+		SMc04307	0.35	+0.1
2,124,827	-		SMc04307	0.35	-0.1
2,124,827	-		SMc04307	0.35	+0.1
2,124,888	+				+0.4
2,124,889	-		SMc04307	0.38	-0.1
2,124,889	-		SMc04307	0.38	-0.1
2,124,889	-		SMc04307	0.38	-0.4
2,124,889	-		SMc04307	0.38	-0.5
2,124,903	-		SMc04307	0.39	-0.1
2,124,923	+		SMc04307	0.39	+0.6
2,124,923	+		SMc04307	0.39	-1.1
2,124,924	-		SMc04307	0.39	+0.1
2,124,964	+		SMc04307	0.41	-0.0
2,124,965	-		SMc04307	0.41	-0.4
2,124,965	-		SMc04307	0.41	-0.4
2,124,965	-		SMc04307	0.41	-0.5
2,125,039	+		SMc04307	0.45	+0.3
2,125,039	+		SMc04307	0.45	+0.5
2,125,052	+		SMc04307	0.45	-0.6
2,125,093	+		SMc04307	0.47	-0.8
2,125,409	+		SMc04307	0.62	-0.2
2,125,409	+		SMc04307	0.62	+0.0
2,125,409	+		SMc04307	0.62	+0.0
2,125,410	-		SMc04307	0.62	-0.6
2,125,436	+		SMc04307	0.63	+0.0
2,125,436	+		SMc04307	0.63	-0.6
2,125,436	+		SMc04307	0.63	-0.2
2,125,437	-		SMc04307	0.63	-0.2
2,125,437	-		SMc04307	0.63	+0.5
2,125,437	-		SMc04307	0.63	+0.2
2,125,437	-		SMc04307	0.63	-1.0
2,125,437	-		SMc04307	0.63	-0.5
2,125,437	-		SMc04307	0.63	-0.0
2,125,437	-		SMc04307	0.63	-0.2
2,125,528	+		SMc04307	0.67	-0.2
2,125,535	+		SMc04307	0.68	+0.1
2,125,536	-		SMc04307	0.68	+0.0
2,125,536	-		SMc04307	0.68	-0.0
2,125,536	-		SMc04307	0.68	-0.8
2,125,536	-		SMc04307	0.68	-0.7
2,125,586	+		SMc04307	0.70	-1.6
2,125,660	+		SMc04307	0.73	-1.4
2,125,660	+		SMc04307	0.73	-0.2
2,125,660	+		SMc04307	0.73	-1.0
2,125,660	+		SMc04307	0.73	-0.3
2,125,660	+		SMc04307	0.73	+0.2
2,125,660	+		SMc04307	0.73	-0.4
2,125,660	+		SMc04307	0.73	-0.7
2,125,660	+		SMc04307	0.73	+0.2
2,125,660	+		SMc04307	0.73	+0.2
2,125,661	-		SMc04307	0.73	-0.6
2,125,661	-		SMc04307	0.73	-0.9
2,125,661	-		SMc04307	0.73	-0.2
2,125,662	+		SMc04307	0.73	-0.7
2,125,662	+		SMc04307	0.73	-0.8
2,125,662	+		SMc04307	0.73	-0.2
2,125,663	-		SMc04307	0.73	-0.9
2,125,663	-		SMc04307	0.73	-0.2
2,125,663	-		SMc04307	0.73	+0.0
2,125,663	-		SMc04307	0.73	+0.2
2,125,663	-		SMc04307	0.73	-0.1
2,125,663	-		SMc04307	0.73	-0.0
2,125,663	-		SMc04307	0.73	-0.4
2,125,720	-		SMc04307	0.76	-0.1
2,125,788	-		SMc04307	0.79	+0.4
2,125,804	-		SMc04307	0.80	-0.6
2,125,804	-		SMc04307	0.80	-0.4
2,125,852	+		SMc04307	0.82	+0.2
2,125,878	+		SMc04307	0.83	+0.1
2,125,878	+		SMc04307	0.83	-0.5
2,126,120	+				+0.0
2,126,120	+				-0.1
2,126,224	+				-0.5
2,126,224	+				+0.3
2,126,225	-				+0.3
2,126,225	-				-1.2
2,126,298	+				+0.1
2,126,360	+				-0.6
2,126,360	+				-0.1
2,126,360	+				-0.2
2,126,361	-				-0.5
2,126,361	-				-2.3
2,126,361	-				-0.3
2,126,361	-				-0.6
2,126,361	-				-0.1
2,126,522	+		SMc04308	0.19	+0.2
2,126,522	+		SMc04308	0.19	-0.4
2,126,522	+		SMc04308	0.19	-0.1
2,126,523	-		SMc04308	0.19	+1.0
2,126,561	+		SMc04308	0.24	+0.4
2,126,606	-		SMc04308	0.29	+0.0
2,126,673	+		SMc04308	0.38	-0.3
2,126,674	-		SMc04308	0.38	-0.4
2,126,674	-		SMc04308	0.38	-0.2
2,126,904	+		SMc04308	0.66	+0.1
2,126,910	+		SMc04308	0.67	+0.2
2,126,910	+		SMc04308	0.67	-0.2
2,127,001	-		SMc04308	0.78	+0.9
2,127,072	+		SMc04308	0.87	-0.8
2,127,072	+		SMc04308	0.87	+0.5
2,127,072	+		SMc04308	0.87	-0.2
2,127,072	+		SMc04308	0.87	-0.4
2,127,102	+				-1.2
2,127,102	+				-0.2
2,127,103	-				+0.3
2,127,103	-				-0.0
2,127,103	-				+2.0
2,127,103	-				-0.4
2,127,171	+				-0.4
2,127,171	+				-0.4
2,127,171	+				-0.3