Strain Fitness in Sinorhizobium meliloti 1021 around SMc04148

Experiment: Paraquat dichloride 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.05 mg/ml
118,201	+		SMc04149	0.33	+0.1
118,201	+		SMc04149	0.33	+0.8
118,202	-		SMc04149	0.33	-0.1
118,202	-		SMc04149	0.33	-0.3
118,219	+		SMc04149	0.35	+0.5
118,265	-		SMc04149	0.38	-0.2
118,342	-		SMc04149	0.44	-0.2
118,406	-		SMc04149	0.49	-0.2
118,417	+		SMc04149	0.50	-0.2
118,432	+		SMc04149	0.51	-0.1
118,645	+		SMc04149	0.67	-0.1
118,645	+		SMc04149	0.67	+0.4
118,646	-		SMc04149	0.67	+0.5
118,685	-		SMc04149	0.70	+0.1
118,692	+		SMc04149	0.70	-0.5
118,709	-		SMc04149	0.71	-0.4
118,709	-		SMc04149	0.71	-0.3
118,711	-		SMc04149	0.72	+0.9
118,861	+		SMc04149	0.83	-0.7
118,873	+		SMc04149	0.84	-1.1
118,886	+		SMc04149	0.85	+0.1
118,886	+		SMc04149	0.85	-0.8
118,887	-		SMc04149	0.85	+0.4
118,887	-		SMc04149	0.85	-0.0
118,887	-		SMc04149	0.85	+0.1
118,887	-		SMc04149	0.85	-0.2
118,903	+		SMc04149	0.86	-0.0
118,997	-				+0.4
119,019	+				-0.0
119,019	+				-1.3
119,020	-				+0.2
119,020	-				-1.0
119,077	+				-0.3
119,078	-				+0.3
119,220	-				-1.5
119,220	-				-0.5
119,310	+				-1.7
119,437	+		SMc04148	0.11	+0.3
119,437	+		SMc04148	0.11	+1.1
119,437	+		SMc04148	0.11	-0.9
119,517	+				-0.3
119,518	-		SMc04148	0.14	-0.1
119,518	-		SMc04148	0.14	+1.2
119,518	-		SMc04148	0.14	-0.1
119,583	-		SMc04148	0.17	-0.1
119,717	-		SMc04148	0.22	+0.6
119,717	-		SMc04148	0.22	+0.2
119,717	-		SMc04148	0.22	-0.2
119,899	-		SMc04148	0.30	+0.8
119,927	-		SMc04148	0.31	-0.5
119,981	+		SMc04148	0.33	+0.7
119,981	+		SMc04148	0.33	+0.3
119,981	+		SMc04148	0.33	+0.1
119,981	+				+0.5
120,062	+		SMc04148	0.37	+0.1
120,063	-		SMc04148	0.37	-1.1
120,063	-		SMc04148	0.37	-0.2
120,125	+		SMc04148	0.40	+0.5
120,126	-		SMc04148	0.40	-0.6
120,218	+		SMc04148	0.43	-0.1
120,264	-		SMc04148	0.45	-0.3
120,273	-		SMc04148	0.46	-1.2
120,281	+		SMc04148	0.46	+0.1
120,281	+		SMc04148	0.46	-0.1
120,282	-		SMc04148	0.46	-0.1
120,447	+		SMc04148	0.53	+0.4
120,506	+				-0.1
120,507	-		SMc04148	0.56	-0.3
120,572	+		SMc04148	0.58	-0.0
120,573	-		SMc04148	0.58	+0.1
120,578	+		SMc04148	0.59	-1.1
120,618	-		SMc04148	0.60	+0.3
120,618	-		SMc04148	0.60	-0.7
120,683	+		SMc04148	0.63	-0.2
120,684	-		SMc04148	0.63	+0.7
120,911	+		SMc04148	0.73	-0.8
120,912	-		SMc04148	0.73	-0.7
120,929	-		SMc04148	0.73	+0.8
121,029	-		SMc04148	0.78	-0.8
121,503	+				-0.4
121,557	+				-0.2
121,630	+				-0.1
121,631	-				+0.1
121,692	+				+0.3
121,693	+				-0.3
121,749	+				-0.7
121,749	+				-0.7
121,749	+				-0.3
121,750	-				+0.2
121,750	-				-0.9
121,750	-				+0.9
121,750	-				-1.6
121,774	+				-0.3
121,775	-				-0.2
121,775	-				+0.4
121,842	+				+0.6
121,842	+				+0.8
121,842	+				+0.1
121,842	+				-0.3
121,843	-				-0.5
121,845	-				-0.5
122,050	+		SMc04147	0.14	-1.0
122,051	-		SMc04147	0.15	-0.1
122,164	+		SMc04147	0.21	+0.4
122,165	-		SMc04147	0.21	-0.7
122,165	-		SMc04147	0.21	+1.1
122,276	-		SMc04147	0.27	-0.8
122,276	-		SMc04147	0.27	-0.7
122,393	+		SMc04147	0.34	+0.0
122,394	-		SMc04147	0.34	-0.1
122,394	-		SMc04147	0.34	-0.1
122,394	-		SMc04147	0.34	-0.2
122,416	-		SMc04147	0.35	+0.0
122,416	-		SMc04147	0.35	+0.3
122,517	+		SMc04147	0.41	-0.3
122,518	-		SMc04147	0.41	-0.2
122,518	-		SMc04147	0.41	+0.3
122,554	+		SMc04147	0.43	-0.4