Strain Fitness in Sinorhizobium meliloti 1021 around SMc03885
Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,550,624 | + | -0.5 | |||
3,551,586 | + | -0.7 | |||
3,551,586 | + | +0.1 | |||
3,551,855 | - | SMc03885 | 0.29 | -0.1 | |
3,551,884 | - | SMc03885 | 0.32 | -0.1 | |
3,551,893 | - | SMc03885 | 0.33 | -1.0 | |
3,551,893 | - | SMc03885 | 0.33 | -0.4 | |
3,551,893 | - | SMc03885 | 0.33 | -0.2 | |
3,552,093 | + | SMc03885 | 0.52 | +0.2 | |
3,552,093 | + | SMc03885 | 0.52 | -2.1 | |
3,552,093 | + | SMc03885 | 0.52 | +0.0 | |
3,552,093 | + | SMc03885 | 0.52 | -0.9 | |
3,552,094 | - | SMc03885 | 0.52 | +0.1 | |
3,552,094 | - | SMc03885 | 0.52 | -0.2 | |
3,552,094 | - | SMc03885 | 0.52 | +0.1 | |
3,552,095 | + | SMc03885 | 0.52 | -0.2 | |
3,552,139 | - | SMc03885 | 0.56 | -0.3 | |
3,552,685 | + | -0.3 | |||
3,552,685 | + | +0.1 | |||
3,552,685 | + | -0.9 | |||
3,552,686 | - | +1.1 | |||
3,552,686 | - | -0.1 | |||
3,552,686 | - | -0.3 | |||
3,552,686 | - | -0.7 | |||
3,552,691 | + | +0.3 | |||
3,552,691 | + | -0.4 | |||
3,552,691 | + | -0.2 | |||
3,552,692 | - | +0.5 | |||
3,552,692 | - | +0.0 | |||
3,552,726 | - | -0.6 | |||
3,552,807 | - | -1.2 | |||
3,552,808 | + | -1.5 | |||
3,552,808 | + | -0.6 | |||
3,552,808 | + | +0.6 | |||
3,552,808 | + | -0.2 | |||
3,552,809 | - | -1.1 | |||
3,552,809 | - | -0.4 |
Or see this region's nucleotide sequence