Strain Fitness in Sinorhizobium meliloti 1021 around SMc02096
Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,612,845 | - | +1.1 | |||
1,612,851 | + | -0.3 | |||
1,612,851 | + | -1.3 | |||
1,612,851 | + | +0.9 | |||
1,612,852 | - | +1.9 | |||
1,612,852 | - | +1.7 | |||
1,612,852 | - | +1.8 | |||
1,612,873 | + | -1.0 | |||
1,612,874 | - | +2.2 | |||
1,612,952 | - | +2.0 | |||
1,612,961 | + | +1.9 | |||
1,612,961 | + | +2.8 | |||
1,612,962 | - | +3.2 | |||
1,612,969 | + | +2.1 | |||
1,613,052 | + | +2.3 | |||
1,613,052 | + | +2.6 | |||
1,613,053 | - | +2.4 | |||
1,613,265 | - | SMc02095 | 0.27 | +2.1 | |
1,613,265 | - | SMc02095 | 0.27 | +2.3 | |
1,613,370 | + | SMc02095 | 0.36 | +2.0 | |
1,613,371 | - | SMc02095 | 0.36 | +2.5 | |
1,613,508 | + | SMc02095 | 0.49 | +2.5 | |
1,613,509 | - | SMc02095 | 0.49 | +2.1 | |
1,613,689 | - | SMc02095 | 0.65 | +3.1 | |
1,613,740 | + | SMc02095 | 0.69 | +2.9 | |
1,613,741 | - | SMc02095 | 0.69 | +2.4 |
Or see this region's nucleotide sequence