Strain Fitness in Sinorhizobium meliloti 1021 around SMc01288

Experiment: Paraquat dichloride 0.05 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc01289 and SMc01288 overlap by 4 nucleotidesSMc01288 and SMc01287 are separated by 230 nucleotidesSMc01287 and SMc01286 are separated by 226 nucleotides SMc01289: SMc01289 - preprotein translocase subunit SecY, at 1,488,589 to 1,489,929 SMc01289 SMc01288: SMc01288 - adenylate kinase, at 1,489,926 to 1,490,504 SMc01288 SMc01287: SMc01287 - 30S ribosomal protein S13, at 1,490,735 to 1,491,103 SMc01287 SMc01286: SMc01286 - 30S ribosomal protein S11, at 1,491,330 to 1,491,719 SMc01286 Position (kb) 1489 1490 1491Strain fitness (log2 ratio) -1 0 1at 1490.502 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml
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1,490,502 + +1.6

Or see this region's nucleotide sequence