Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00919 and SMc00918 are separated by 5 nucleotides SMc00918 and SMc00917 overlap by 4 nucleotides SMc00917 and SMc00916 are separated by 119 nucleotides
SMc00919: SMc00919 - histidyl-tRNA synthetase, at 863,149 to 864,663
SMc00919
SMc00918: SMc00918 - ATP phosphoribosyltransferase regulatory subunit, at 864,669 to 865,808
SMc00918
SMc00917: SMc00917 - ATP phosphoribosyltransferase (EC 2.4.2.17) <small>(from data)</small>, at 865,805 to 866,500
SMc00917
SMc00916: SMc00916 - glutathione S-transferase, at 866,620 to 867,363
SMc00916
Position (kb) 864
865
866 Strain fitness (log2 ratio) -1
0
1 at 864.747 kb on - strand at 864.888 kb on - strand, within SMc00918 at 864.919 kb on - strand, within SMc00918 at 864.919 kb on - strand, within SMc00918 at 864.924 kb on + strand, within SMc00918 at 864.924 kb on + strand, within SMc00918 at 864.925 kb on - strand, within SMc00918 at 864.925 kb on - strand, within SMc00918 at 864.972 kb on + strand, within SMc00918 at 864.972 kb on + strand, within SMc00918 at 865.369 kb on + strand, within SMc00918 at 865.370 kb on - strand, within SMc00918 at 865.629 kb on + strand, within SMc00918 at 865.632 kb on + strand, within SMc00918 at 865.632 kb on + strand, within SMc00918 at 865.632 kb on + strand, within SMc00918 at 865.633 kb on - strand, within SMc00918 at 865.633 kb on - strand, within SMc00918 at 865.736 kb on + strand at 865.737 kb on - strand at 865.955 kb on + strand, within SMc00917 at 865.955 kb on + strand, within SMc00917 at 866.129 kb on + strand, within SMc00917 at 866.130 kb on - strand, within SMc00917 at 866.217 kb on - strand, within SMc00917 at 866.217 kb on - strand, within SMc00917 at 866.452 kb on + strand at 866.452 kb on + strand at 866.569 kb on + strand at 866.569 kb on + strand at 866.606 kb on + strand at 866.689 kb on + strand at 866.689 kb on + strand at 866.753 kb on - strand, within SMc00916 at 866.753 kb on - strand, within SMc00916
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml remove 864,747 - -1.2 864,888 - SMc00918 0.19 -0.3 864,919 - SMc00918 0.22 -0.2 864,919 - SMc00918 0.22 -0.1 864,924 + SMc00918 0.22 +0.6 864,924 + SMc00918 0.22 -0.4 864,925 - SMc00918 0.22 -1.0 864,925 - SMc00918 0.22 -0.2 864,972 + SMc00918 0.27 -0.5 864,972 + SMc00918 0.27 +0.1 865,369 + SMc00918 0.61 -1.1 865,370 - SMc00918 0.61 +0.6 865,629 + SMc00918 0.84 -0.3 865,632 + SMc00918 0.84 -0.1 865,632 + SMc00918 0.84 -0.4 865,632 + SMc00918 0.84 -0.7 865,633 - SMc00918 0.85 -0.8 865,633 - SMc00918 0.85 -0.6 865,736 + -0.4 865,737 - +0.1 865,955 + SMc00917 0.22 +0.2 865,955 + SMc00917 0.22 +0.2 866,129 + SMc00917 0.47 +0.0 866,130 - SMc00917 0.47 +0.2 866,217 - SMc00917 0.59 -0.4 866,217 - SMc00917 0.59 +0.2 866,452 + +0.7 866,452 + -0.3 866,569 + -0.4 866,569 + -1.7 866,606 + -1.0 866,689 + -0.5 866,689 + -0.1 866,753 - SMc00916 0.18 +0.8 866,753 - SMc00916 0.18 +0.1
Or see this region's nucleotide sequence