Strain Fitness in Sinorhizobium meliloti 1021 around SMc00493

Experiment: Paraquat dichloride 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.05 mg/ml
1,916,165	+		SMc00495	0.47	+3.0
1,916,168	+		SMc00495	0.47	+3.0
1,916,354	+		SMc00495	0.72	+3.2
1,916,355	-		SMc00495	0.72	+1.2
1,916,567	+				-0.2
1,916,568	-				+0.3
1,916,605	-				+0.2
1,916,794	+		SMc00494	0.85	-0.1
1,916,810	+				+0.2
1,916,810	+				+0.1
1,916,811	-				-0.4
1,916,811	-				-1.4
1,916,878	+				-0.5
1,916,879	-				+0.2
1,916,879	-				+0.4
1,916,879	-				-0.1
1,916,880	+				+0.9
1,916,880	+				-0.7
1,916,881	-				-0.1
1,916,881	-				+0.1
1,916,881	-				-0.1
1,916,902	+				+0.4
1,916,902	+				-2.7
1,916,903	-				-0.5
1,916,903	-				+1.0
1,916,903	-				+0.4
1,916,903	-				+0.4
1,916,903	-				-0.1
1,916,903	-				+0.7
1,916,903	-				+0.9
1,916,906	+				-1.1
1,916,907	-				+0.8
1,916,907	-				-0.6
1,916,907	-				+0.7
1,917,069	-		SMc00493	0.23	-1.0
1,917,078	-		SMc00493	0.25	+0.3
1,917,078	-		SMc00493	0.25	+0.7
1,917,299	+		SMc00493	0.58	+0.6
1,917,350	+		SMc00493	0.65	+0.1
1,917,350	+		SMc00493	0.65	-0.1
1,917,350	+		SMc00493	0.65	-1.1
1,917,350	+		SMc00493	0.65	-0.2
1,917,350	+		SMc00493	0.65	+0.6
1,917,411	-		SMc00493	0.74	-0.8
1,917,570	+				+0.8
1,917,571	-				+0.2
1,917,571	-				-0.2
1,917,571	-				-0.6
1,917,571	-				-0.0
1,917,595	+				+0.5
1,917,595	+				+0.4
1,917,688	+				-1.2
1,917,688	+				-1.1
1,917,688	+				-0.5
1,917,688	+				-0.3
1,917,689	-				-1.4
1,917,689	-				-1.4
1,917,689	-				-1.0
1,917,881	+		SMc00492	0.47	-2.7
1,918,256	+		SMc00491	0.35	+0.4
1,918,257	-		SMc00491	0.36	-0.3
1,918,257	-		SMc00491	0.36	+0.7
1,918,257	-		SMc00491	0.36	-1.1
1,918,257	-		SMc00491	0.36	-0.2
1,918,258	+		SMc00491	0.37	-0.7
1,918,259	-		SMc00491	0.37	+0.8
1,918,259	-		SMc00491	0.37	+0.2
1,918,329	+		SMc00491	0.83	-0.3
1,918,329	+		SMc00491	0.83	-0.5
1,918,330	-		SMc00491	0.84	-0.6
1,918,330	-		SMc00491	0.84	+0.5
1,918,486	+				+1.0
1,918,487	-				-0.3