Strain Fitness in Sinorhizobium meliloti 1021 around SMc00110

Experiment: Paraquat dichloride 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.05 mg/ml
1,072,424	+		SMc00047	0.16	-1.6
1,072,897	+		SMc00047	0.69	-1.4
1,072,897	+		SMc00047	0.69	+0.0
1,073,022	-		SMc00047	0.83	-0.5
1,073,022	-		SMc00047	0.83	+0.4
1,073,094	-				+0.4
1,073,235	+				-1.1
1,073,237	+				-0.3
1,073,249	+				-0.8
1,073,249	+				+0.1
1,073,249	+				-0.2
1,073,250	-				+1.6
1,073,250	-				-0.3
1,073,303	+				-0.5
1,073,303	+				-0.5
1,073,303	+				-0.3
1,073,303	+				+0.7
1,073,303	+				-0.3
1,073,303	+				-0.1
1,073,304	-				-0.8
1,073,322	+				-0.4
1,073,324	+				+0.9
1,073,324	+				-0.0
1,073,324	+				-0.4
1,073,325	-				+0.0
1,073,325	-				-0.6
1,073,397	-				-0.3
1,073,409	-				-0.2
1,073,409	-				+0.4
1,073,452	+				-0.3
1,073,580	-				+2.2
1,073,580	-		SMc00110	0.15	-0.5
1,073,646	-		SMc00110	0.18	-0.0
1,073,683	-		SMc00110	0.20	-0.5
1,073,864	+		SMc00110	0.27	+0.8
1,073,876	+		SMc00110	0.28	+0.4
1,073,876	+		SMc00110	0.28	-0.2
1,074,083	+		SMc00110	0.37	+0.1
1,074,083	+		SMc00110	0.37	-0.7
1,074,083	+		SMc00110	0.37	+0.7
1,074,083	+		SMc00110	0.37	-0.6
1,074,083	+		SMc00110	0.37	-0.5
1,074,083	+		SMc00110	0.37	-1.7
1,074,083	+		SMc00110	0.37	-0.2
1,074,084	-		SMc00110	0.37	-0.1
1,074,084	-		SMc00110	0.37	+0.0
1,074,084	-		SMc00110	0.37	-0.9
1,074,084	-		SMc00110	0.37	+0.4
1,074,084	-		SMc00110	0.37	-0.3
1,074,084	-		SMc00110	0.37	-0.1
1,074,084	-		SMc00110	0.37	+1.6
1,074,084	-		SMc00110	0.37	-0.4
1,074,102	+		SMc00110	0.38	-0.5
1,074,172	+		SMc00110	0.41	+0.1
1,074,181	-		SMc00110	0.41	-0.3
1,074,220	+		SMc00110	0.43	+0.7
1,074,231	+		SMc00110	0.43	+0.5
1,074,264	-		SMc00110	0.45	-1.0
1,074,264	-		SMc00110	0.45	+0.2
1,074,264	-				-0.4
1,074,329	+		SMc00110	0.47	-0.7
1,074,329	+		SMc00110	0.47	-0.6
1,074,329	+		SMc00110	0.47	-0.0
1,074,353	+		SMc00110	0.48	-0.5
1,074,392	+		SMc00110	0.50	-0.2
1,074,393	-		SMc00110	0.50	+0.1
1,074,422	-		SMc00110	0.51	-0.0
1,074,422	-		SMc00110	0.51	-0.9
1,074,512	+		SMc00110	0.55	-0.6
1,074,512	+		SMc00110	0.55	+0.8
1,074,513	-		SMc00110	0.55	+0.1
1,074,579	-		SMc00110	0.58	-0.4
1,074,582	-		SMc00110	0.58	+0.2
1,074,582	-		SMc00110	0.58	-0.8
1,074,582	-		SMc00110	0.58	+0.5
1,074,582	-		SMc00110	0.58	+0.1
1,074,584	+		SMc00110	0.58	-1.2
1,074,708	-		SMc00110	0.64	-0.6
1,074,758	+		SMc00110	0.66	+0.6
1,074,759	-		SMc00110	0.66	-0.2
1,074,884	+		SMc00110	0.71	-0.6
1,074,884	+		SMc00110	0.71	-1.2
1,074,884	+		SMc00110	0.71	-0.8
1,074,884	+		SMc00110	0.71	-0.8
1,074,884	+		SMc00110	0.71	-0.3
1,074,885	-		SMc00110	0.71	-0.1
1,074,885	-		SMc00110	0.71	+0.2
1,074,885	-		SMc00110	0.71	-0.0
1,074,921	-		SMc00110	0.73	+0.1
1,074,969	-		SMc00110	0.75	+0.0
1,075,028	+		SMc00110	0.77	-1.0
1,075,028	+		SMc00110	0.77	+0.4
1,075,056	-				-0.2
1,075,056	-		SMc00110	0.78	+0.2
1,075,078	+		SMc00110	0.79	+0.0
1,075,078	+		SMc00110	0.79	-0.7
1,075,079	-		SMc00110	0.79	-1.6
1,075,079	-		SMc00110	0.79	-0.1
1,075,161	-		SMc00110	0.83	+0.1
1,075,274	-		SMc00110	0.88	-1.6
1,075,385	+				+1.1
1,075,385	+				-0.7
1,075,460	+				-0.0
1,075,460	+				-0.7
1,075,460	+				+0.1
1,075,460	+				+0.1
1,075,461	-				-0.4
1,075,463	+				+1.7
1,075,464	-				+0.9
1,075,736	+				-0.6
1,075,737	-				-0.6
1,075,843	+				-0.5
1,075,843	+				-0.2
1,075,844	-				+0.2
1,075,901	+				-0.4
1,075,942	-				+0.3
1,076,345	+		SMc00453	0.34	-0.6
1,076,346	-		SMc00453	0.34	-0.4
1,076,465	+		SMc00453	0.42	-0.6
1,076,466	-		SMc00453	0.42	+0.4
1,076,466	-		SMc00453	0.42	+0.6
1,076,516	+		SMc00453	0.45	-0.4
1,076,517	-		SMc00453	0.46	+0.1