Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2313 and SMa2315 are separated by 131 nucleotides SMa2315 and SMa2317 are separated by 9 nucleotides SMa2317 and SMa2319 are separated by 107 nucleotides
SMa2313: SMa2313 - Oxidoreductase, at 1,289,113 to 1,291,146
SMa2313
SMa2315: SMa2315 - hypothetical protein, at 1,291,278 to 1,291,817
SMa2315
SMa2317: SMa2317 - hypothetical protein, at 1,291,827 to 1,292,054
SMa2317
SMa2319: SMa2319 - gst14 glutatione S-transferase, at 1,292,162 to 1,292,809
SMa2319
Position (kb)
1291
1292
1293 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1290.980 kb on + strand at 1290.992 kb on - strand at 1290.992 kb on - strand at 1290.992 kb on - strand at 1291.080 kb on + strand at 1291.265 kb on + strand at 1291.365 kb on + strand, within SMa2315 at 1291.559 kb on + strand, within SMa2315 at 1291.600 kb on - strand, within SMa2315 at 1291.600 kb on - strand, within SMa2315 at 1291.652 kb on - strand, within SMa2315 at 1291.667 kb on + strand, within SMa2315 at 1291.789 kb on + strand at 1291.805 kb on - strand at 1291.805 kb on - strand at 1291.853 kb on + strand, within SMa2317 at 1291.853 kb on + strand, within SMa2317 at 1291.853 kb on + strand, within SMa2317 at 1291.853 kb on + strand, within SMa2317 at 1291.960 kb on - strand, within SMa2317 at 1291.960 kb on - strand, within SMa2317 at 1292.041 kb on + strand at 1292.094 kb on - strand at 1292.149 kb on + strand at 1292.167 kb on + strand at 1292.167 kb on + strand at 1292.167 kb on + strand at 1292.167 kb on + strand at 1292.168 kb on - strand at 1292.168 kb on - strand at 1292.168 kb on - strand at 1292.168 kb on - strand at 1292.168 kb on - strand at 1292.168 kb on - strand at 1292.170 kb on + strand at 1292.170 kb on + strand at 1292.170 kb on + strand at 1292.341 kb on + strand, within SMa2319 at 1292.341 kb on + strand, within SMa2319 at 1292.345 kb on + strand, within SMa2319 at 1292.345 kb on + strand, within SMa2319 at 1292.346 kb on - strand, within SMa2319 at 1292.540 kb on + strand, within SMa2319 at 1292.656 kb on - strand, within SMa2319 at 1292.724 kb on - strand, within SMa2319 at 1292.724 kb on - strand, within SMa2319 at 1292.753 kb on + strand at 1292.836 kb on + strand at 1292.903 kb on + strand at 1292.903 kb on + strand at 1292.904 kb on - strand at 1292.904 kb on - strand at 1292.912 kb on + strand at 1293.052 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml remove 1,290,980 + -0.1 1,290,992 - -0.2 1,290,992 - -0.3 1,290,992 - -2.4 1,291,080 + -0.6 1,291,265 + -0.5 1,291,365 + SMa2315 0.16 +1.0 1,291,559 + SMa2315 0.52 +0.7 1,291,600 - SMa2315 0.60 +0.2 1,291,600 - SMa2315 0.60 -0.0 1,291,652 - SMa2315 0.69 -0.0 1,291,667 + SMa2315 0.72 -0.5 1,291,789 + +0.1 1,291,805 - -0.7 1,291,805 - +1.2 1,291,853 + SMa2317 0.11 +0.1 1,291,853 + SMa2317 0.11 +0.2 1,291,853 + SMa2317 0.11 +1.7 1,291,853 + SMa2317 0.11 +1.1 1,291,960 - SMa2317 0.58 +0.7 1,291,960 - SMa2317 0.58 +0.4 1,292,041 + +0.2 1,292,094 - +0.4 1,292,149 + -0.5 1,292,167 + +0.1 1,292,167 + +0.2 1,292,167 + -1.1 1,292,167 + +0.5 1,292,168 - +2.0 1,292,168 - +1.5 1,292,168 - -1.9 1,292,168 - +0.5 1,292,168 - -0.0 1,292,168 - -0.2 1,292,170 + -1.0 1,292,170 + -0.6 1,292,170 + +0.6 1,292,341 + SMa2319 0.28 -0.3 1,292,341 + SMa2319 0.28 -0.3 1,292,345 + SMa2319 0.28 -0.2 1,292,345 + SMa2319 0.28 +0.9 1,292,346 - SMa2319 0.28 +0.6 1,292,540 + SMa2319 0.58 -0.4 1,292,656 - SMa2319 0.76 -0.9 1,292,724 - SMa2319 0.87 +0.2 1,292,724 - SMa2319 0.87 +0.4 1,292,753 + -1.1 1,292,836 + +0.0 1,292,903 + -1.1 1,292,903 + +1.1 1,292,904 - -0.6 1,292,904 - -0.7 1,292,912 + -0.3 1,293,052 - -0.1
Or see this region's nucleotide sequence