Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0665 and SMa0667 are separated by 497 nucleotides SMa0667 and SMa0669 are separated by 3 nucleotides
SMa0665: SMa0665 - hypothetical protein, at 353,876 to 355,030
SMa0665
SMa0667: SMa0667 - hypothetical protein, at 355,528 to 356,016
SMa0667
SMa0669: SMa0669 - hemolysin D, at 356,020 to 357,249
SMa0669
Position (kb) 355
356
357 Strain fitness (log2 ratio) -2
-1
0
1
2 at 354.573 kb on - strand, within SMa0665 at 354.612 kb on + strand, within SMa0665 at 354.613 kb on - strand, within SMa0665 at 354.646 kb on + strand, within SMa0665 at 354.707 kb on + strand, within SMa0665 at 354.775 kb on + strand, within SMa0665 at 354.775 kb on + strand, within SMa0665 at 354.776 kb on - strand, within SMa0665 at 354.776 kb on - strand, within SMa0665 at 354.840 kb on + strand, within SMa0665 at 354.840 kb on + strand, within SMa0665 at 354.877 kb on + strand, within SMa0665 at 355.238 kb on + strand at 355.243 kb on + strand at 355.248 kb on + strand at 355.364 kb on + strand at 355.369 kb on - strand at 355.508 kb on + strand at 355.661 kb on - strand, within SMa0667 at 355.790 kb on + strand, within SMa0667 at 355.791 kb on - strand, within SMa0667 at 355.974 kb on - strand at 355.995 kb on + strand at 355.996 kb on - strand at 355.996 kb on - strand at 356.080 kb on + strand at 356.080 kb on + strand at 356.081 kb on - strand at 356.081 kb on - strand at 356.112 kb on - strand at 356.197 kb on + strand, within SMa0669 at 356.197 kb on + strand, within SMa0669 at 356.212 kb on - strand, within SMa0669 at 356.243 kb on + strand, within SMa0669 at 356.285 kb on - strand, within SMa0669 at 356.285 kb on - strand, within SMa0669 at 356.285 kb on - strand, within SMa0669 at 356.441 kb on + strand, within SMa0669 at 356.465 kb on - strand, within SMa0669 at 356.521 kb on - strand, within SMa0669 at 356.730 kb on - strand, within SMa0669 at 356.730 kb on - strand, within SMa0669 at 356.760 kb on + strand, within SMa0669 at 356.760 kb on + strand, within SMa0669 at 356.761 kb on - strand, within SMa0669 at 356.761 kb on - strand, within SMa0669 at 356.761 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml remove 354,573 - SMa0665 0.60 -0.7 354,612 + SMa0665 0.64 -0.1 354,613 - SMa0665 0.64 -0.0 354,646 + SMa0665 0.67 -0.7 354,707 + SMa0665 0.72 -0.1 354,775 + SMa0665 0.78 +0.7 354,775 + SMa0665 0.78 +1.5 354,776 - SMa0665 0.78 +0.2 354,776 - SMa0665 0.78 +0.5 354,840 + SMa0665 0.83 -0.0 354,840 + SMa0665 0.83 -0.8 354,877 + SMa0665 0.87 +2.0 355,238 + +0.3 355,243 + -0.1 355,248 + -0.2 355,364 + +0.4 355,369 - +0.0 355,508 + -1.7 355,661 - SMa0667 0.27 +0.2 355,790 + SMa0667 0.54 +1.6 355,791 - SMa0667 0.54 -0.3 355,974 - +0.5 355,995 + -0.8 355,996 - -2.3 355,996 - +0.3 356,080 + +0.9 356,080 + -1.2 356,081 - -0.2 356,081 - -0.2 356,112 - +0.0 356,197 + SMa0669 0.14 +0.5 356,197 + SMa0669 0.14 -0.5 356,212 - SMa0669 0.16 -0.4 356,243 + SMa0669 0.18 +0.1 356,285 - SMa0669 0.22 -0.3 356,285 - SMa0669 0.22 +1.2 356,285 - SMa0669 0.22 -0.1 356,441 + SMa0669 0.34 +0.3 356,465 - SMa0669 0.36 -1.0 356,521 - SMa0669 0.41 -0.8 356,730 - SMa0669 0.58 -0.5 356,730 - SMa0669 0.58 +0.1 356,760 + SMa0669 0.60 +0.2 356,760 + SMa0669 0.60 +0.1 356,761 - SMa0669 0.60 -1.1 356,761 - SMa0669 0.60 -1.1 356,761 - +1.3
Or see this region's nucleotide sequence