Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20262 and SM_b20263 are separated by 186 nucleotides SM_b20263 and SM_b20264 are separated by 66 nucleotides SM_b20264 and SM_b20265 are separated by 12 nucleotides
SM_b20262: SM_b20262 - semialdehyde dehydrogenase, at 266,814 to 268,331
_b20262
SM_b20263: SM_b20263 - amino acid ABC transporter substrate-binding protein, at 268,518 to 269,324
_b20263
SM_b20264: SM_b20264 - amino acid ABC transporter permease, at 269,391 to 270,056
_b20264
SM_b20265: SM_b20265 - amino acid ABC transporter permease, at 270,069 to 270,722
_b20265
Position (kb) 268
269
270 Strain fitness (log2 ratio) -1
0
1 at 268.079 kb on + strand, within SM_b20262 at 268.439 kb on + strand at 268.439 kb on + strand at 268.468 kb on + strand at 268.469 kb on - strand at 268.698 kb on + strand, within SM_b20263 at 268.860 kb on + strand, within SM_b20263 at 268.861 kb on - strand, within SM_b20263 at 268.959 kb on + strand, within SM_b20263 at 268.959 kb on + strand, within SM_b20263 at 268.959 kb on + strand, within SM_b20263 at 268.959 kb on + strand, within SM_b20263 at 268.960 kb on - strand, within SM_b20263 at 269.019 kb on + strand, within SM_b20263 at 269.081 kb on + strand at 269.196 kb on + strand, within SM_b20263 at 269.400 kb on + strand at 269.400 kb on + strand at 269.400 kb on + strand at 269.401 kb on - strand at 269.614 kb on - strand, within SM_b20264 at 269.614 kb on - strand, within SM_b20264 at 269.661 kb on + strand, within SM_b20264 at 269.661 kb on + strand, within SM_b20264 at 269.663 kb on + strand, within SM_b20264 at 269.663 kb on + strand, within SM_b20264 at 269.664 kb on - strand, within SM_b20264 at 269.704 kb on - strand, within SM_b20264 at 269.704 kb on - strand, within SM_b20264 at 269.988 kb on + strand, within SM_b20264 at 269.988 kb on + strand, within SM_b20264 at 269.989 kb on - strand, within SM_b20264 at 269.991 kb on + strand at 269.992 kb on - strand at 270.214 kb on - strand, within SM_b20265
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.05 mg/ml remove 268,079 + SM_b20262 0.83 -0.2 268,439 + +0.3 268,439 + +0.6 268,468 + +0.5 268,469 - +0.1 268,698 + SM_b20263 0.22 +0.7 268,860 + SM_b20263 0.42 +0.5 268,861 - SM_b20263 0.43 +0.7 268,959 + SM_b20263 0.55 +1.1 268,959 + SM_b20263 0.55 -0.5 268,959 + SM_b20263 0.55 +0.9 268,959 + SM_b20263 0.55 -0.0 268,960 - SM_b20263 0.55 +0.5 269,019 + SM_b20263 0.62 +0.0 269,081 + -0.5 269,196 + SM_b20263 0.84 -0.2 269,400 + -0.2 269,400 + -1.3 269,400 + +0.4 269,401 - +0.3 269,614 - SM_b20264 0.33 +1.1 269,614 - SM_b20264 0.33 +0.4 269,661 + SM_b20264 0.41 +0.5 269,661 + SM_b20264 0.41 +0.0 269,663 + SM_b20264 0.41 +1.6 269,663 + SM_b20264 0.41 -0.3 269,664 - SM_b20264 0.41 -0.1 269,704 - SM_b20264 0.47 +0.2 269,704 - SM_b20264 0.47 -0.6 269,988 + SM_b20264 0.90 -0.7 269,988 + SM_b20264 0.90 +0.2 269,989 - SM_b20264 0.90 +1.4 269,991 + +0.3 269,992 - -0.2 270,214 - SM_b20265 0.22 -0.1
Or see this region's nucleotide sequence