Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20075
Experiment: Paraquat dichloride 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.05 mg/ml |
---|---|---|---|---|---|
remove | |||||
82,716 | + | SM_b20073 | 0.45 | +0.0 | |
82,716 | + | SM_b20073 | 0.45 | +0.4 | |
82,971 | + | SM_b20073 | 0.75 | -1.3 | |
82,971 | + | SM_b20073 | 0.75 | -0.8 | |
82,978 | + | SM_b20073 | 0.75 | -1.3 | |
82,978 | + | SM_b20073 | 0.75 | -0.3 | |
83,268 | - | +0.0 | |||
83,380 | + | -0.2 | |||
83,380 | + | +0.3 | |||
83,381 | - | +0.0 | |||
83,555 | + | SM_b20074 | 0.70 | -0.7 | |
83,555 | + | SM_b20074 | 0.70 | +0.4 | |
83,555 | + | SM_b20074 | 0.70 | +0.4 | |
83,555 | + | SM_b20074 | 0.70 | -0.8 | |
83,556 | - | SM_b20074 | 0.71 | +0.4 | |
83,556 | - | SM_b20074 | 0.71 | -0.9 | |
83,556 | - | SM_b20074 | 0.71 | -0.7 | |
83,759 | + | SM_b20075 | 0.44 | +1.2 | |
83,760 | - | SM_b20075 | 0.44 | +0.5 | |
83,927 | + | -1.9 | |||
83,927 | + | +0.6 | |||
83,928 | - | -0.3 | |||
83,928 | - | -0.2 | |||
83,964 | + | +0.4 | |||
83,965 | - | -0.2 | |||
83,965 | - | -0.4 | |||
84,215 | + | SM_b20076 | 0.25 | -0.4 | |
84,517 | + | SM_b20076 | 0.54 | -0.0 | |
84,562 | + | SM_b20076 | 0.59 | -0.4 | |
84,563 | - | SM_b20076 | 0.59 | +0.3 | |
84,598 | + | SM_b20076 | 0.62 | -0.6 | |
84,598 | + | SM_b20076 | 0.62 | -2.0 | |
84,599 | - | SM_b20076 | 0.62 | -0.2 |
Or see this region's nucleotide sequence