Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS24265 and RR42_RS24270 are separated by 98 nucleotides
RR42_RS24265: RR42_RS24265 - hypothetical protein, at 771,699 to 772,415
_RS24265
RR42_RS24270: RR42_RS24270 - hypothetical protein, at 772,514 to 773,482
_RS24270
Position (kb) 771
772
773 Strain fitness (log2 ratio) -2
-1
0
1 at 770.745 kb on + strand at 770.745 kb on + strand at 770.745 kb on + strand at 770.868 kb on - strand at 770.881 kb on + strand at 770.926 kb on + strand at 770.926 kb on + strand at 770.927 kb on - strand at 771.016 kb on + strand at 771.016 kb on + strand at 771.017 kb on - strand at 771.017 kb on - strand at 771.017 kb on - strand at 771.017 kb on - strand at 771.035 kb on + strand at 771.036 kb on - strand at 771.036 kb on - strand at 771.070 kb on + strand at 771.070 kb on + strand at 771.071 kb on - strand at 771.085 kb on + strand at 771.085 kb on + strand at 771.086 kb on - strand at 771.154 kb on + strand at 771.154 kb on + strand at 771.154 kb on + strand at 771.154 kb on + strand at 771.154 kb on + strand at 771.155 kb on - strand at 771.155 kb on - strand at 771.155 kb on - strand at 771.155 kb on - strand at 771.156 kb on + strand at 771.156 kb on + strand at 771.157 kb on - strand at 771.213 kb on + strand at 771.297 kb on + strand at 771.341 kb on + strand at 771.393 kb on + strand at 771.526 kb on - strand at 771.526 kb on - strand at 771.613 kb on - strand at 771.701 kb on - strand at 771.742 kb on + strand at 771.743 kb on - strand at 771.743 kb on - strand at 771.758 kb on + strand at 771.758 kb on + strand at 771.787 kb on - strand, within RR42_RS24265 at 771.896 kb on + strand, within RR42_RS24265 at 771.955 kb on + strand, within RR42_RS24265 at 771.959 kb on - strand, within RR42_RS24265 at 771.984 kb on + strand, within RR42_RS24265 at 771.985 kb on - strand, within RR42_RS24265 at 771.985 kb on - strand, within RR42_RS24265 at 772.035 kb on + strand, within RR42_RS24265 at 772.036 kb on - strand, within RR42_RS24265 at 772.036 kb on - strand, within RR42_RS24265 at 772.198 kb on + strand, within RR42_RS24265 at 772.198 kb on + strand, within RR42_RS24265 at 772.198 kb on + strand, within RR42_RS24265 at 772.199 kb on - strand, within RR42_RS24265 at 772.199 kb on - strand, within RR42_RS24265 at 772.199 kb on - strand, within RR42_RS24265 at 772.199 kb on - strand, within RR42_RS24265 at 772.199 kb on - strand, within RR42_RS24265 at 772.199 kb on - strand, within RR42_RS24265 at 772.459 kb on + strand at 772.460 kb on - strand at 772.460 kb on - strand at 772.463 kb on + strand at 772.463 kb on + strand at 772.464 kb on - strand at 772.526 kb on + strand at 772.527 kb on - strand at 772.580 kb on - strand at 772.580 kb on - strand at 772.580 kb on - strand at 772.580 kb on - strand at 772.755 kb on + strand, within RR42_RS24270 at 772.853 kb on - strand, within RR42_RS24270 at 772.938 kb on + strand, within RR42_RS24270 at 772.938 kb on + strand, within RR42_RS24270 at 772.939 kb on - strand at 773.164 kb on - strand, within RR42_RS24270 at 773.164 kb on - strand, within RR42_RS24270 at 773.164 kb on - strand, within RR42_RS24270 at 773.230 kb on - strand, within RR42_RS24270
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 770,745 + -0.5 770,745 + -0.5 770,745 + +0.0 770,868 - +1.3 770,881 + +1.5 770,926 + +0.6 770,926 + -0.8 770,927 - -0.4 771,016 + -0.2 771,016 + +0.3 771,017 - -0.0 771,017 - -0.1 771,017 - -0.1 771,017 - +0.0 771,035 + -0.5 771,036 - +0.4 771,036 - -0.2 771,070 + +0.0 771,070 + -0.3 771,071 - -0.7 771,085 + -0.1 771,085 + -0.1 771,086 - +0.2 771,154 + -1.0 771,154 + -1.0 771,154 + -2.0 771,154 + -0.5 771,154 + -0.7 771,155 - -0.4 771,155 - -0.8 771,155 - +0.0 771,155 - +0.5 771,156 + +0.3 771,156 + +0.2 771,157 - +0.0 771,213 + +0.0 771,297 + -2.7 771,341 + -1.2 771,393 + -0.4 771,526 - +1.0 771,526 - +0.5 771,613 - +0.3 771,701 - +1.3 771,742 + -0.6 771,743 - -0.4 771,743 - -0.3 771,758 + -0.1 771,758 + +0.0 771,787 - RR42_RS24265 0.12 -1.0 771,896 + RR42_RS24265 0.27 -0.0 771,955 + RR42_RS24265 0.36 -0.8 771,959 - RR42_RS24265 0.36 -0.1 771,984 + RR42_RS24265 0.40 -0.2 771,985 - RR42_RS24265 0.40 +0.1 771,985 - RR42_RS24265 0.40 -0.1 772,035 + RR42_RS24265 0.47 -0.2 772,036 - RR42_RS24265 0.47 -0.3 772,036 - RR42_RS24265 0.47 +0.2 772,198 + RR42_RS24265 0.70 +0.6 772,198 + RR42_RS24265 0.70 -0.6 772,198 + RR42_RS24265 0.70 -0.0 772,199 - RR42_RS24265 0.70 -0.5 772,199 - RR42_RS24265 0.70 +0.0 772,199 - RR42_RS24265 0.70 -0.4 772,199 - RR42_RS24265 0.70 -0.3 772,199 - RR42_RS24265 0.70 -0.7 772,199 - RR42_RS24265 0.70 +0.0 772,459 + +0.0 772,460 - -0.4 772,460 - +0.2 772,463 + -1.0 772,463 + +0.4 772,464 - -0.3 772,526 + -0.6 772,527 - +0.0 772,580 - +1.0 772,580 - -0.4 772,580 - -0.4 772,580 - -0.2 772,755 + RR42_RS24270 0.25 +0.8 772,853 - RR42_RS24270 0.35 +0.7 772,938 + RR42_RS24270 0.44 +1.5 772,938 + RR42_RS24270 0.44 +0.7 772,939 - +0.6 773,164 - RR42_RS24270 0.67 +0.8 773,164 - RR42_RS24270 0.67 +0.9 773,164 - RR42_RS24270 0.67 -0.8 773,230 - RR42_RS24270 0.74 +0.7
Or see this region's nucleotide sequence