Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS31710

Experiment: Growth at 25C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at 25C
4,574,437	+				+2.1
4,574,438	-				-2.1
4,574,455	+				-0.8
4,574,455	+				+1.1
4,574,455	+				+0.8
4,574,455	+				+2.8
4,574,455	+				+1.0
4,574,455	+				+0.2
4,574,455	+				-2.4
4,574,456	-				+1.1
4,574,456	-				+1.5
4,574,456	-				-2.6
4,574,459	+				+1.2
4,574,459	+				-0.2
4,574,460	-				-1.2
4,574,460	-				+1.7
4,574,460	-				-1.2
4,574,460	-				-2.0
4,574,460	-				+2.6
4,574,473	-				+3.8
4,574,502	+				+0.1
4,574,502	+				-0.8
4,574,502	+				+0.8
4,574,502	+				-0.5
4,574,503	-				+0.3
4,574,507	+				+1.4
4,574,507	+				+1.5
4,574,507	+				-0.8
4,574,507	+				-1.2
4,574,507	+				-1.0
4,574,507	+				+1.9
4,574,507	+				+1.3
4,574,507	+				+1.8
4,574,507	+				+3.6
4,574,507	+				+1.3
4,574,507	+				+0.5
4,574,507	+				-1.2
4,574,508	-				-1.2
4,574,508	-				-0.2
4,574,508	-				-2.0
4,574,508	-				+0.7
4,574,508	-				-1.4
4,574,508	-				+0.2
4,574,508	-				-1.9
4,574,508	-				-2.3
4,574,508	-				-1.8
4,574,508	-				+0.2
4,574,508	-				+3.2
4,574,508	-				-2.9
4,574,508	-				+1.8
4,574,508	-				+0.4
4,574,508	-				-1.2
4,574,511	+		PFLU_RS30970	0.11	-1.2
4,574,511	+		PFLU_RS30970	0.11	+1.2
4,574,511	+		PFLU_RS30970	0.11	+1.6
4,574,512	-		PFLU_RS30970	0.11	-2.0
4,574,512	-		PFLU_RS30970	0.11	+1.0
4,574,512	-		PFLU_RS30970	0.11	-1.7
4,574,512	-		PFLU_RS30970	0.11	-2.0
4,574,512	-		PFLU_RS30970	0.11	+3.8
4,574,512	-		PFLU_RS30970	0.11	-1.4
4,574,518	+		PFLU_RS30970	0.13	-2.6
4,574,518	+		PFLU_RS30970	0.13	+2.6
4,574,519	-		PFLU_RS30970	0.14	+1.1
4,574,519	-		PFLU_RS30970	0.14	-1.0
4,574,519	-		PFLU_RS30970	0.14	-1.0
4,574,519	-		PFLU_RS30970	0.14	+1.4
4,574,520	+		PFLU_RS30970	0.14	-0.6
4,574,520	+		PFLU_RS30970	0.14	+0.6
4,574,520	+		PFLU_RS30970	0.14	+1.5
4,574,521	-		PFLU_RS30970	0.15	+2.2
4,574,521	-		PFLU_RS30970	0.15	+1.9
4,574,521	-		PFLU_RS30970	0.15	-1.0
4,574,521	-		PFLU_RS30970	0.15	-1.2
4,574,521	-		PFLU_RS30970	0.15	+0.0
4,574,521	-		PFLU_RS30970	0.15	-1.7
4,574,590	+		PFLU_RS30970	0.41	+1.2
4,574,591	-		PFLU_RS30970	0.41	+1.1
4,574,612	-		PFLU_RS30970	0.49	-0.1
4,574,626	+		PFLU_RS30970	0.55	+1.0
4,574,626	+		PFLU_RS30970	0.55	-1.8
4,574,627	-		PFLU_RS30970	0.55	-1.2
4,574,627	-		PFLU_RS30970	0.55	+0.4
4,574,627	-		PFLU_RS30970	0.55	+1.3
4,574,627	-		PFLU_RS30970	0.55	-1.7
4,574,627	-		PFLU_RS30970	0.55	-1.4
4,574,627	-		PFLU_RS30970	0.55	+0.8
4,574,627	-		PFLU_RS30970	0.55	-2.0
4,574,672	-		PFLU_RS30970	0.72	-0.6
4,574,686	+		PFLU_RS30970	0.78	-2.9
4,574,686	+		PFLU_RS30970	0.78	-2.3
4,574,687	-		PFLU_RS30970	0.78	+1.4
4,574,712	+		PFLU_RS30970	0.88	-2.4
4,574,712	+		PFLU_RS30970	0.88	-0.8
4,574,719	+				-2.6
4,574,751	+				-1.8
4,574,767	+				+2.6
4,574,767	+				-0.2
4,574,768	-				-1.2
4,574,768	-				+0.8
4,574,805	+				+0.2
4,574,805	+				+1.6
4,574,805	+				-0.8
4,574,805	+				-0.2
4,574,806	-				-1.8
4,574,806	-				+1.6
4,574,806	-				+2.5
4,574,806	-				+0.8
4,574,858	+				+1.0
4,574,858	+				+0.3
4,574,858	+				-2.1
4,574,858	+				-1.0
4,574,858	+				+2.3
4,574,858	+				-0.8
4,574,858	+				-1.6
4,574,858	+				-0.2
4,574,858	+				+1.6
4,574,858	+				-1.9
4,574,859	-				+0.1
4,574,859	-				-1.0
4,574,859	-				-2.2
4,574,859	-				-2.0
4,574,859	-				-0.6
4,574,859	-				-1.0
4,574,859	-				+1.5
4,574,859	-				+1.1
4,574,859	-				+0.8
4,574,859	-				+0.4
4,574,861	+				+2.2
4,574,861	+				-2.0
4,574,861	+				-2.7
4,574,861	+				+0.2
4,574,862	-				-1.4
4,574,862	-				+3.2
4,574,862	-				-1.2
4,574,862	-				+0.4
4,574,888	+				-1.4
4,574,888	+				+0.8
4,574,888	+				+0.8
4,574,888	+				-0.6
4,574,888	+				-2.2
4,574,889	-				+1.8
4,574,889	-				-2.3
4,574,889	-				-0.8
4,574,889	-				+3.1
4,574,909	-				+0.2
4,574,921	+				+0.8
4,574,921	+				-1.4
4,574,922	-				+1.3
4,574,922	-				-3.3
4,574,922	-				+1.6
4,574,922	-				+0.2
4,574,948	+				+0.9
4,574,948	+				-1.2
4,574,948	+				-0.8
4,574,948	+				+0.7
4,574,949	-				+1.5
4,574,949	-				+1.0
4,574,949	-				+0.2
4,574,949	-				-1.2
4,574,949	-				+1.3
4,574,972	+				-2.9
4,574,999	+				-1.2
4,574,999	+				+0.9
4,574,999	+				-2.4
4,575,000	-				+0.8
4,575,000	-				-2.8
4,575,000	-				+1.9
4,575,037	+				+0.9
4,575,037	+				-2.9
4,575,038	-				+0.0
4,575,041	+				+0.8
4,575,041	+				-0.2
4,575,041	+				+2.1
4,575,042	-				-1.2
4,575,042	-				+1.3
4,575,042	-				-1.4
4,575,086	+				-1.4
4,575,086	+				+1.6
4,575,086	+				-1.2
4,575,087	-				+2.0
4,575,108	+				+1.4
4,575,119	+				+2.5
4,575,120	-				+0.7
4,575,185	+				-0.5
4,575,282	-				-2.1
4,575,282	-				-2.5
4,575,342	-				+1.9
4,575,342	-				+1.1
4,575,345	-				-2.1
4,575,348	+				-0.4
4,575,349	-				-2.8
4,575,349	-				+1.6
4,575,351	+				+1.5
4,575,352	-				-0.8
4,575,393	+				-3.0
4,575,394	-				-0.1
4,575,394	-				+1.3
4,575,394	-				-0.2
4,575,416	+				-0.2
4,575,416	+				+2.9
4,575,416	+				+1.8
4,575,418	+				-1.2
4,575,419	-				-3.1
4,575,477	+		PFLU_RS31710	0.14	-0.4
4,575,531	+		PFLU_RS31710	0.32	+0.4
4,575,577	-		PFLU_RS31710	0.47	-3.2
4,575,656	+		PFLU_RS31710	0.73	-1.7
4,575,724	+				+1.1
4,575,791	-				-1.7
4,575,791	-				+2.0
4,575,791	-				-2.1
4,575,791	-				+1.0
4,575,795	-				+1.8
4,575,795	-				+2.0
4,575,795	-				-2.4
4,575,826	-				-1.5
4,575,850	+				-1.8
4,575,850	+				-1.5
4,575,850	+				+0.5
4,575,851	-				+1.8
4,575,903	-				+0.3
4,575,931	+				-2.9
4,575,931	+				+0.3
4,575,941	+				-1.0
4,575,941	+				+0.2
4,575,942	-				+1.7
4,575,942	-				+1.1
4,576,007	-				-0.2
4,576,023	-				-1.4
4,576,023	-				-0.5
4,576,116	+				-0.8
4,576,116	+				-1.0
4,576,126	+				+2.0
4,576,126	+				+1.2
4,576,154	+				+2.5
4,576,154	+				+0.4
4,576,155	-				-1.5
4,576,155	-				+0.1
4,576,155	-				+1.5
4,576,155	-				-2.5
4,576,155	-				-1.2
4,576,155	-				-0.8
4,576,155	-				+0.8
4,576,164	-				+1.8
4,576,171	-				+0.9
4,576,171	-				-0.2
4,576,186	+				-1.8
4,576,186	+				-0.2
4,576,186	+				+1.8
4,576,187	-				-3.7
4,576,187	-				-1.7
4,576,275	+				-0.5
4,576,275	+				+1.0
4,576,275	+				-2.0
4,576,275	+				-1.8
4,576,276	-				+3.2
4,576,276	-				+1.5
4,576,276	-				-0.9
4,576,276	-				-1.2
4,576,276	-				-2.0
4,576,297	+				-0.8
4,576,297	+				-0.1
4,576,298	-				-1.5
4,576,298	-				+2.3
4,576,298	-				-1.2
4,576,298	-				+1.5
4,576,299	+				-0.3
4,576,299	+				-1.9
4,576,299	+				+1.0
4,576,299	+				-1.5
4,576,299	+				+1.1
4,576,299	+				-1.4
4,576,300	-				-0.8
4,576,300	-				+3.2
4,576,300	-				-0.9
4,576,300	-				+2.4
4,576,300	-				-0.2
4,576,300	-				+1.1
4,576,300	-				-1.9
4,576,300	-				-1.8
4,576,300	-				+0.2
4,576,300	-				+3.3
4,576,300	-				+1.2
4,576,300	-				-2.2
4,576,300	-				-0.4
4,576,324	+				-0.5
4,576,324	+				-2.5
4,576,324	+				+1.9
4,576,324	+				+1.1
4,576,324	+				+0.5
4,576,324	+				-2.0
4,576,324	+				-1.0
4,576,324	+				-0.2
4,576,324	+				+2.4
4,576,324	+				+0.9
4,576,324	+				-0.9
4,576,325	-				+2.3
4,576,325	-				-1.9
4,576,325	-				-1.4
4,576,325	-				-1.8
4,576,325	-				-1.2
4,576,325	-				+1.7
4,576,325	-				-1.5
4,576,325	-				-1.5
4,576,325	-				+0.5
4,576,325	-				-1.0
4,576,325	-				+1.6
4,576,325	-				-3.3
4,576,325	-				+1.3
4,576,325	-				-1.2
4,576,325	-				-0.7
4,576,325	-				-0.8
4,576,341	+				-0.4
4,576,357	+				-1.4
4,576,358	-				-0.5
4,576,359	+				+0.7
4,576,359	+				-1.9
4,576,359	+				-2.9
4,576,359	+				+1.0
4,576,359	+				+0.5
4,576,359	+				+2.3
4,576,359	+				-1.8
4,576,359	+				-0.2
4,576,359	+				+0.1
4,576,359	+				+3.2
4,576,359	+				+0.3
4,576,359	+				-1.7
4,576,359	+				-0.5
4,576,359	+				+1.2
4,576,359	+				+0.7
4,576,360	-				-0.5
4,576,360	-				+0.2
4,576,360	-				-2.0
4,576,360	-				+1.6
4,576,360	-				-1.4
4,576,360	-				-0.5
4,576,360	-				-1.8
4,576,360	-				+0.1
4,576,384	+				+0.2
4,576,384	+				+1.1
4,576,384	+				+0.6
4,576,385	-				-2.3
4,576,385	-				-0.8
4,576,385	-				+0.2
4,576,385	-				+1.0
4,576,385	-				+1.6
4,576,385	-				-2.5
4,576,385	-				+3.8
4,576,443	+				+2.6
4,576,443	+				+1.1
4,576,443	+				+0.2
4,576,443	+				+1.2
4,576,443	+				-2.5
4,576,443	+				+1.5
4,576,443	+				-2.1
4,576,443	+				-2.5
4,576,443	+				+2.1
4,576,443	+				+2.5
4,576,444	-				+1.3
4,576,444	-				-1.7
4,576,444	-				-0.7
4,576,444	-				-1.4
4,576,444	-				+0.1
4,576,485	-		PFLU_RS20225	0.13	-1.8
4,576,485	-		PFLU_RS20225	0.13	-1.7
4,576,485	-		PFLU_RS20225	0.13	+1.7
4,576,485	-		PFLU_RS20225	0.13	-2.0
4,576,486	+		PFLU_RS20225	0.13	-1.5
4,576,486	+		PFLU_RS20225	0.13	-2.0
4,576,486	+		PFLU_RS20225	0.13	-3.1
4,576,486	+		PFLU_RS20225	0.13	-3.0
4,576,486	+		PFLU_RS20225	0.13	+2.1
4,576,487	-		PFLU_RS20225	0.13	+0.5
4,576,487	-		PFLU_RS20225	0.13	+1.9
4,576,597	+		PFLU_RS20225	0.34	+0.8
4,576,597	+		PFLU_RS20225	0.34	-2.2
4,576,597	+		PFLU_RS20225	0.34	-1.2
4,576,597	+		PFLU_RS20225	0.34	-1.2
4,576,598	-		PFLU_RS20225	0.34	+1.6
4,576,598	-		PFLU_RS20225	0.34	-0.2
4,576,598	-		PFLU_RS20225	0.34	-1.8
4,576,598	-		PFLU_RS20225	0.34	-1.4
4,576,598	-		PFLU_RS20225	0.34	-2.5
4,576,644	+		PFLU_RS20225	0.43	-2.6
4,576,644	+		PFLU_RS20225	0.43	+1.5
4,576,644	+		PFLU_RS20225	0.43	+0.4
4,576,645	-		PFLU_RS20225	0.43	-1.7
4,576,645	-		PFLU_RS20225	0.43	-2.2
4,576,645	-		PFLU_RS20225	0.43	-0.6
4,576,670	+		PFLU_RS20225	0.48	-2.7
4,576,670	+		PFLU_RS20225	0.48	-2.3
4,576,671	-		PFLU_RS20225	0.48	+1.4
4,576,671	-		PFLU_RS20225	0.48	+2.0
4,576,687	-		PFLU_RS20225	0.51	-2.6
4,576,687	-		PFLU_RS20225	0.51	-1.5
4,576,687	-		PFLU_RS20225	0.51	-0.5
4,576,687	-		PFLU_RS20225	0.51	+0.8