Experiment: Growth at 25C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS19815 and PFLU_RS19820 overlap by 4 nucleotides PFLU_RS19820 and PFLU_RS19825 are separated by 329 nucleotides
PFLU_RS19815: PFLU_RS19815 - FAD-binding oxidoreductase, at 4,484,458 to 4,485,642
_RS19815
PFLU_RS19820: PFLU_RS19820 - GNAT family N-acetyltransferase, at 4,485,639 to 4,486,484
_RS19820
PFLU_RS19825: PFLU_RS19825 - aldehyde dehydrogenase family protein, at 4,486,814 to 4,488,277
_RS19825
Position (kb) 4485
4486
4487 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4484.639 kb on - strand, within PFLU_RS19815 at 4484.736 kb on + strand, within PFLU_RS19815 at 4484.736 kb on + strand, within PFLU_RS19815 at 4484.736 kb on + strand, within PFLU_RS19815 at 4484.736 kb on + strand, within PFLU_RS19815 at 4484.736 kb on + strand, within PFLU_RS19815 at 4484.737 kb on - strand, within PFLU_RS19815 at 4484.737 kb on - strand, within PFLU_RS19815 at 4484.750 kb on - strand, within PFLU_RS19815 at 4484.782 kb on + strand, within PFLU_RS19815 at 4484.783 kb on - strand, within PFLU_RS19815 at 4484.873 kb on + strand, within PFLU_RS19815 at 4484.873 kb on + strand, within PFLU_RS19815 at 4484.873 kb on + strand, within PFLU_RS19815 at 4484.873 kb on + strand, within PFLU_RS19815 at 4484.873 kb on + strand, within PFLU_RS19815 at 4484.873 kb on + strand, within PFLU_RS19815 at 4484.874 kb on - strand, within PFLU_RS19815 at 4484.874 kb on - strand, within PFLU_RS19815 at 4484.874 kb on - strand, within PFLU_RS19815 at 4484.887 kb on + strand, within PFLU_RS19815 at 4484.888 kb on - strand, within PFLU_RS19815 at 4485.169 kb on + strand, within PFLU_RS19815 at 4485.223 kb on + strand, within PFLU_RS19815 at 4485.223 kb on + strand, within PFLU_RS19815 at 4485.224 kb on - strand, within PFLU_RS19815 at 4485.224 kb on - strand, within PFLU_RS19815 at 4485.224 kb on - strand, within PFLU_RS19815 at 4485.224 kb on - strand, within PFLU_RS19815 at 4485.224 kb on - strand, within PFLU_RS19815 at 4485.224 kb on - strand, within PFLU_RS19815 at 4485.224 kb on - strand, within PFLU_RS19815 at 4485.224 kb on - strand, within PFLU_RS19815 at 4485.305 kb on - strand, within PFLU_RS19815 at 4485.409 kb on + strand, within PFLU_RS19815 at 4485.409 kb on + strand, within PFLU_RS19815 at 4485.409 kb on + strand, within PFLU_RS19815 at 4485.409 kb on + strand, within PFLU_RS19815 at 4485.410 kb on - strand, within PFLU_RS19815 at 4485.410 kb on - strand, within PFLU_RS19815 at 4485.467 kb on - strand, within PFLU_RS19815 at 4485.467 kb on - strand, within PFLU_RS19815 at 4485.521 kb on + strand, within PFLU_RS19815 at 4485.522 kb on - strand, within PFLU_RS19815 at 4485.522 kb on - strand, within PFLU_RS19815 at 4485.639 kb on - strand at 4485.639 kb on - strand at 4485.651 kb on + strand at 4485.651 kb on + strand at 4485.651 kb on + strand at 4485.651 kb on + strand at 4485.651 kb on + strand at 4485.652 kb on - strand at 4485.652 kb on - strand at 4485.652 kb on - strand at 4485.652 kb on - strand at 4485.658 kb on - strand at 4485.706 kb on + strand at 4485.707 kb on - strand at 4485.707 kb on - strand at 4485.828 kb on + strand, within PFLU_RS19820 at 4485.828 kb on + strand, within PFLU_RS19820 at 4485.829 kb on - strand, within PFLU_RS19820 at 4485.829 kb on - strand, within PFLU_RS19820 at 4485.829 kb on - strand, within PFLU_RS19820 at 4485.845 kb on - strand, within PFLU_RS19820 at 4485.845 kb on - strand, within PFLU_RS19820 at 4486.241 kb on + strand, within PFLU_RS19820 at 4486.241 kb on + strand, within PFLU_RS19820 at 4486.242 kb on - strand, within PFLU_RS19820 at 4486.242 kb on - strand, within PFLU_RS19820 at 4486.482 kb on + strand at 4486.613 kb on - strand at 4486.613 kb on - strand at 4486.667 kb on + strand at 4486.750 kb on - strand at 4486.750 kb on - strand at 4486.834 kb on + strand at 4486.871 kb on + strand at 4486.872 kb on - strand at 4486.945 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 25C remove 4,484,639 - PFLU_RS19815 0.15 -2.0 4,484,736 + PFLU_RS19815 0.23 +2.4 4,484,736 + PFLU_RS19815 0.23 -2.3 4,484,736 + PFLU_RS19815 0.23 +0.2 4,484,736 + PFLU_RS19815 0.23 -0.2 4,484,736 + PFLU_RS19815 0.23 -0.4 4,484,737 - PFLU_RS19815 0.24 -2.1 4,484,737 - PFLU_RS19815 0.24 +0.3 4,484,750 - PFLU_RS19815 0.25 -0.3 4,484,782 + PFLU_RS19815 0.27 -2.1 4,484,783 - PFLU_RS19815 0.27 +1.3 4,484,873 + PFLU_RS19815 0.35 +0.2 4,484,873 + PFLU_RS19815 0.35 +1.5 4,484,873 + PFLU_RS19815 0.35 +3.3 4,484,873 + PFLU_RS19815 0.35 +2.4 4,484,873 + PFLU_RS19815 0.35 -1.7 4,484,873 + PFLU_RS19815 0.35 +2.4 4,484,874 - PFLU_RS19815 0.35 -1.1 4,484,874 - PFLU_RS19815 0.35 +2.9 4,484,874 - PFLU_RS19815 0.35 -0.6 4,484,887 + PFLU_RS19815 0.36 +2.9 4,484,888 - PFLU_RS19815 0.36 +0.6 4,485,169 + PFLU_RS19815 0.60 +0.7 4,485,223 + PFLU_RS19815 0.65 -1.3 4,485,223 + PFLU_RS19815 0.65 -0.3 4,485,224 - PFLU_RS19815 0.65 -0.9 4,485,224 - PFLU_RS19815 0.65 -2.8 4,485,224 - PFLU_RS19815 0.65 +1.7 4,485,224 - PFLU_RS19815 0.65 +0.6 4,485,224 - PFLU_RS19815 0.65 -0.6 4,485,224 - PFLU_RS19815 0.65 +3.9 4,485,224 - PFLU_RS19815 0.65 -0.6 4,485,224 - PFLU_RS19815 0.65 -1.7 4,485,305 - PFLU_RS19815 0.71 -2.3 4,485,409 + PFLU_RS19815 0.80 +1.7 4,485,409 + PFLU_RS19815 0.80 +1.1 4,485,409 + PFLU_RS19815 0.80 +0.3 4,485,409 + PFLU_RS19815 0.80 -0.8 4,485,410 - PFLU_RS19815 0.80 +1.5 4,485,410 - PFLU_RS19815 0.80 -0.6 4,485,467 - PFLU_RS19815 0.85 -0.5 4,485,467 - PFLU_RS19815 0.85 +1.7 4,485,521 + PFLU_RS19815 0.90 +4.3 4,485,522 - PFLU_RS19815 0.90 -1.3 4,485,522 - PFLU_RS19815 0.90 +2.0 4,485,639 - -0.5 4,485,639 - +0.6 4,485,651 + +1.7 4,485,651 + -0.6 4,485,651 + -0.3 4,485,651 + +1.6 4,485,651 + -1.1 4,485,652 - -0.3 4,485,652 - -2.4 4,485,652 - +1.9 4,485,652 - +1.7 4,485,658 - +3.6 4,485,706 + -0.3 4,485,707 - +1.1 4,485,707 - +1.3 4,485,828 + PFLU_RS19820 0.22 -0.8 4,485,828 + PFLU_RS19820 0.22 +0.7 4,485,829 - PFLU_RS19820 0.22 -2.2 4,485,829 - PFLU_RS19820 0.22 -2.9 4,485,829 - PFLU_RS19820 0.22 +2.1 4,485,845 - PFLU_RS19820 0.24 -0.3 4,485,845 - PFLU_RS19820 0.24 -1.7 4,486,241 + PFLU_RS19820 0.71 +1.6 4,486,241 + PFLU_RS19820 0.71 -1.7 4,486,242 - PFLU_RS19820 0.71 -0.6 4,486,242 - PFLU_RS19820 0.71 +0.2 4,486,482 + -2.3 4,486,613 - +1.4 4,486,613 - -2.6 4,486,667 + -1.7 4,486,750 - +1.9 4,486,750 - -2.3 4,486,834 + +1.6 4,486,871 + -2.3 4,486,872 - -1.7 4,486,945 - -0.1
Or see this region's nucleotide sequence