Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22070 and HSERO_RS22075 are separated by 3 nucleotides HSERO_RS22075 and HSERO_RS22080 are separated by 11 nucleotides HSERO_RS22080 and HSERO_RS22085 are separated by 164 nucleotides
HSERO_RS22070: HSERO_RS22070 - CDP-4-keto-6-deoxy-D-glucose-3-dehydrase, at 5,045,370 to 5,046,542
_RS22070
HSERO_RS22075: HSERO_RS22075 - phosphohexose mutase, at 5,046,546 to 5,047,268
_RS22075
HSERO_RS22080: HSERO_RS22080 - phosphoheptose isomerase, at 5,047,280 to 5,047,852
_RS22080
HSERO_RS22085: HSERO_RS22085 - D,D-heptose 1,7-bisphosphate phosphatase, at 5,048,017 to 5,048,607
_RS22085
Position (kb) 5046
5047
5048 Strain fitness (log2 ratio) -1
0
1
2 at 5045.569 kb on - strand, within HSERO_RS22070 at 5045.774 kb on - strand, within HSERO_RS22070 at 5045.796 kb on + strand, within HSERO_RS22070 at 5045.870 kb on - strand, within HSERO_RS22070 at 5045.885 kb on - strand, within HSERO_RS22070 at 5045.930 kb on - strand, within HSERO_RS22070 at 5045.976 kb on - strand, within HSERO_RS22070 at 5046.591 kb on + strand at 5046.625 kb on - strand, within HSERO_RS22075 at 5046.707 kb on + strand, within HSERO_RS22075 at 5046.755 kb on + strand, within HSERO_RS22075 at 5046.950 kb on + strand, within HSERO_RS22075 at 5046.963 kb on - strand, within HSERO_RS22075 at 5047.249 kb on + strand at 5047.257 kb on - strand at 5047.257 kb on - strand at 5047.272 kb on + strand at 5047.446 kb on + strand, within HSERO_RS22080 at 5047.561 kb on - strand, within HSERO_RS22080 at 5047.640 kb on - strand, within HSERO_RS22080 at 5047.646 kb on + strand, within HSERO_RS22080 at 5047.675 kb on - strand, within HSERO_RS22080 at 5047.745 kb on - strand, within HSERO_RS22080 at 5047.805 kb on + strand at 5047.814 kb on - strand at 5047.824 kb on + strand at 5047.919 kb on + strand at 5047.976 kb on + strand at 5047.982 kb on + strand at 5047.984 kb on - strand at 5048.027 kb on - strand at 5048.027 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 5,045,569 - HSERO_RS22070 0.17 -0.2 5,045,774 - HSERO_RS22070 0.34 +1.0 5,045,796 + HSERO_RS22070 0.36 +0.7 5,045,870 - HSERO_RS22070 0.43 +1.8 5,045,885 - HSERO_RS22070 0.44 +1.0 5,045,930 - HSERO_RS22070 0.48 +1.3 5,045,976 - HSERO_RS22070 0.52 +0.6 5,046,591 + +1.0 5,046,625 - HSERO_RS22075 0.11 +2.1 5,046,707 + HSERO_RS22075 0.22 +0.1 5,046,755 + HSERO_RS22075 0.29 +0.9 5,046,950 + HSERO_RS22075 0.56 +1.7 5,046,963 - HSERO_RS22075 0.58 +1.6 5,047,249 + -0.1 5,047,257 - +2.2 5,047,257 - -1.0 5,047,272 + +1.5 5,047,446 + HSERO_RS22080 0.29 +0.3 5,047,561 - HSERO_RS22080 0.49 +0.1 5,047,640 - HSERO_RS22080 0.63 +0.5 5,047,646 + HSERO_RS22080 0.64 -0.8 5,047,675 - HSERO_RS22080 0.69 -0.0 5,047,745 - HSERO_RS22080 0.81 +0.0 5,047,805 + +0.7 5,047,814 - +0.0 5,047,824 + -0.5 5,047,919 + -0.3 5,047,976 + -0.6 5,047,982 + -0.3 5,047,984 - -0.3 5,048,027 - +0.1 5,048,027 - +0.2
Or see this region's nucleotide sequence