Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03505 and HSERO_RS03510 are separated by 108 nucleotides HSERO_RS03510 and HSERO_RS03515 overlap by 4 nucleotides HSERO_RS03515 and HSERO_RS03520 are separated by 10 nucleotides
HSERO_RS03505: HSERO_RS03505 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 761,937 to 763,085
_RS03505
HSERO_RS03510: HSERO_RS03510 - proline aminopeptidase P II, at 763,194 to 764,540
_RS03510
HSERO_RS03515: HSERO_RS03515 - mannose-1-phosphate guanylyltransferase, at 764,537 to 765,253
_RS03515
HSERO_RS03520: HSERO_RS03520 - aminoglycoside phosphotransferase, at 765,264 to 766,295
_RS03520
Position (kb) 763
764
765 Strain fitness (log2 ratio) -1
0
1 at 763.251 kb on - strand at 763.642 kb on + strand at 763.725 kb on - strand, within HSERO_RS03510 at 763.941 kb on - strand, within HSERO_RS03510 at 764.011 kb on + strand, within HSERO_RS03510 at 764.147 kb on + strand, within HSERO_RS03510 at 764.150 kb on + strand, within HSERO_RS03510 at 764.191 kb on - strand, within HSERO_RS03510 at 765.091 kb on - strand, within HSERO_RS03515
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 763,251 - +0.9 763,642 + -0.9 763,725 - HSERO_RS03510 0.39 +1.7 763,941 - HSERO_RS03510 0.55 +0.6 764,011 + HSERO_RS03510 0.61 +1.3 764,147 + HSERO_RS03510 0.71 +0.3 764,150 + HSERO_RS03510 0.71 +1.1 764,191 - HSERO_RS03510 0.74 -0.4 765,091 - HSERO_RS03515 0.77 -1.5
Or see this region's nucleotide sequence