Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS03255 and HSERO_RS03260 are separated by 355 nucleotides HSERO_RS03260 and HSERO_RS03265 are separated by 2 nucleotides
HSERO_RS03255: HSERO_RS03255 - sulfonate ABC transporter substrate-binding protein, at 715,975 to 716,961
_RS03255
HSERO_RS03260: HSERO_RS03260 - histidine kinase, at 717,317 to 717,925
_RS03260
HSERO_RS03265: HSERO_RS03265 - transcription regulator protein, at 717,928 to 719,556
_RS03265
Position (kb) 717
718 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 716.637 kb on - strand at 716.639 kb on + strand, within HSERO_RS03255 at 716.682 kb on + strand, within HSERO_RS03255 at 716.722 kb on - strand, within HSERO_RS03255 at 716.825 kb on - strand, within HSERO_RS03255 at 716.825 kb on - strand, within HSERO_RS03255 at 716.825 kb on - strand, within HSERO_RS03255 at 716.995 kb on - strand at 717.011 kb on + strand at 717.026 kb on - strand at 717.267 kb on + strand at 717.267 kb on + strand at 717.280 kb on - strand at 717.535 kb on - strand, within HSERO_RS03260 at 718.098 kb on - strand, within HSERO_RS03265 at 718.183 kb on + strand, within HSERO_RS03265 at 718.222 kb on + strand, within HSERO_RS03265 at 718.230 kb on - strand, within HSERO_RS03265 at 718.487 kb on + strand, within HSERO_RS03265 at 718.500 kb on - strand, within HSERO_RS03265 at 718.500 kb on - strand, within HSERO_RS03265 at 718.528 kb on - strand, within HSERO_RS03265 at 718.616 kb on + strand, within HSERO_RS03265 at 718.812 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 716,637 - +3.9 716,639 + HSERO_RS03255 0.67 +0.5 716,682 + HSERO_RS03255 0.72 -0.3 716,722 - HSERO_RS03255 0.76 +0.7 716,825 - HSERO_RS03255 0.86 -0.3 716,825 - HSERO_RS03255 0.86 -0.5 716,825 - HSERO_RS03255 0.86 +0.4 716,995 - +1.7 717,011 + -0.5 717,026 - -1.2 717,267 + -0.5 717,267 + -1.1 717,280 - +0.1 717,535 - HSERO_RS03260 0.36 +0.6 718,098 - HSERO_RS03265 0.10 +0.6 718,183 + HSERO_RS03265 0.16 +0.4 718,222 + HSERO_RS03265 0.18 +0.9 718,230 - HSERO_RS03265 0.19 -0.6 718,487 + HSERO_RS03265 0.34 +0.6 718,500 - HSERO_RS03265 0.35 -4.5 718,500 - HSERO_RS03265 0.35 +0.6 718,528 - HSERO_RS03265 0.37 +0.6 718,616 + HSERO_RS03265 0.42 +0.4 718,812 - +0.5
Or see this region's nucleotide sequence