Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3706

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
3,820,878	+				-0.6
3,820,885	+				-0.9
3,820,886	-				+0.0
3,820,886	-				+0.1
3,820,886	-				+0.4
3,821,007	+				-0.4
3,821,008	-				+0.6
3,821,008	-				-0.1
3,821,008	-				+0.2
3,821,008	-				+0.4
3,821,161	+				+2.9
3,821,161	+		Ga0059261_3705	0.16	+0.3
3,821,161	+		Ga0059261_3705	0.16	-1.2
3,821,161	+		Ga0059261_3705	0.16	+0.4
3,821,161	+		Ga0059261_3705	0.16	+0.3
3,821,162	-		Ga0059261_3705	0.16	-0.3
3,821,162	-		Ga0059261_3705	0.16	+0.9
3,821,162	-		Ga0059261_3705	0.16	+0.4
3,821,162	-		Ga0059261_3705	0.16	-0.0
3,821,162	-		Ga0059261_3705	0.16	-1.1
3,821,314	+		Ga0059261_3705	0.39	+0.7
3,821,314	+		Ga0059261_3705	0.39	-0.4
3,821,314	+		Ga0059261_3705	0.39	-1.2
3,821,381	+		Ga0059261_3705	0.49	-0.2
3,821,381	+		Ga0059261_3705	0.49	+0.3
3,821,382	-		Ga0059261_3705	0.49	+1.1
3,821,382	-		Ga0059261_3705	0.49	+0.3
3,821,491	+		Ga0059261_3705	0.65	+1.1
3,821,491	+		Ga0059261_3705	0.65	+0.8
3,821,491	+		Ga0059261_3705	0.65	+0.3
3,821,491	+		Ga0059261_3705	0.65	-0.0
3,821,492	-		Ga0059261_3705	0.65	-0.3
3,821,572	+		Ga0059261_3705	0.77	+0.4
3,821,573	-		Ga0059261_3705	0.77	+1.1
3,821,573	-		Ga0059261_3705	0.77	+1.4
3,821,861	+		Ga0059261_3706	0.36	+0.8
3,821,861	+		Ga0059261_3706	0.36	+0.5
3,821,861	+		Ga0059261_3706	0.36	-1.2
3,821,861	+		Ga0059261_3706	0.36	+1.1
3,821,861	+		Ga0059261_3706	0.36	-0.1
3,821,862	-		Ga0059261_3706	0.36	-0.2
3,821,862	-		Ga0059261_3706	0.36	+0.4
3,821,862	-		Ga0059261_3706	0.36	+0.1
3,821,862	-		Ga0059261_3706	0.36	-1.3
3,822,199	+		Ga0059261_3707	0.12	+0.1
3,822,316	+		Ga0059261_3707	0.29	+0.4
3,822,316	+		Ga0059261_3707	0.29	-0.1
3,822,317	-		Ga0059261_3707	0.29	+0.3
3,822,317	-		Ga0059261_3707	0.29	-0.7
3,822,317	-		Ga0059261_3707	0.29	-0.4
3,822,317	-		Ga0059261_3707	0.29	+0.2
3,822,317	-		Ga0059261_3707	0.29	+1.3
3,822,402	+		Ga0059261_3707	0.42	-0.6
3,822,403	-		Ga0059261_3707	0.42	+0.1
3,822,537	-		Ga0059261_3707	0.61	-0.4
3,822,537	-		Ga0059261_3707	0.61	+0.6
3,822,562	+		Ga0059261_3707	0.65	-0.8
3,822,563	-		Ga0059261_3707	0.65	+0.9
3,822,563	-		Ga0059261_3707	0.65	-0.9
3,822,563	-		Ga0059261_3707	0.65	+0.2
3,822,563	-		Ga0059261_3707	0.65	-0.2
3,822,563	-				-0.3
3,822,845	+				-1.7
3,822,845	+				-1.5
3,822,845	+				+0.0
3,822,845	+				+1.3
3,822,846	-				+0.9
3,822,846	-				-0.5
3,822,846	-				-0.0
3,822,846	-				+0.5
3,822,846	-				+0.2
3,822,884	+				+0.1
3,822,946	+		Ga0059261_3708	0.21	+0.1
3,822,946	+		Ga0059261_3708	0.21	+0.3
3,822,947	-		Ga0059261_3708	0.22	+0.1
3,822,977	+		Ga0059261_3708	0.28	+0.2
3,822,977	+		Ga0059261_3708	0.28	-0.8
3,822,977	+		Ga0059261_3708	0.28	+0.4
3,822,977	+		Ga0059261_3708	0.28	+1.1
3,822,977	+		Ga0059261_3708	0.28	+0.0
3,822,977	+		Ga0059261_3708	0.28	-0.1
3,822,978	-		Ga0059261_3708	0.28	-0.2
3,822,978	-		Ga0059261_3708	0.28	-0.7
3,823,007	+		Ga0059261_3708	0.34	+0.2
3,823,008	-		Ga0059261_3708	0.34	+0.9