Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3450

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
3,574,539	-				-2.5
3,574,554	+				+0.2
3,574,554	+				+0.2
3,574,554	+				+0.5
3,574,555	-				-0.3
3,574,611	+		Ga0059261_3448	0.13	-0.4
3,574,611	+		Ga0059261_3448	0.13	-0.4
3,574,611	+		Ga0059261_3448	0.13	+0.9
3,574,611	+		Ga0059261_3448	0.13	+0.3
3,574,611	+		Ga0059261_3448	0.13	-0.4
3,574,611	+		Ga0059261_3448	0.13	+1.8
3,574,611	+		Ga0059261_3448	0.13	+0.5
3,574,611	+				+1.4
3,574,611	+		Ga0059261_3448	0.13	-2.6
3,574,611	+		Ga0059261_3448	0.13	-0.0
3,574,611	+		Ga0059261_3448	0.13	-0.6
3,574,612	-		Ga0059261_3448	0.13	-0.2
3,574,612	-		Ga0059261_3448	0.13	+0.3
3,574,612	-		Ga0059261_3448	0.13	+0.2
3,574,612	-		Ga0059261_3448	0.13	-0.7
3,574,612	-		Ga0059261_3448	0.13	-1.0
3,574,612	-		Ga0059261_3448	0.13	+0.2
3,574,612	-		Ga0059261_3448	0.13	+0.4
3,574,612	-		Ga0059261_3448	0.13	+0.5
3,574,612	-		Ga0059261_3448	0.13	-0.2
3,574,839	+		Ga0059261_3448	0.68	+0.8
3,574,840	-		Ga0059261_3448	0.68	-0.0
3,574,840	-		Ga0059261_3448	0.68	+0.5
3,574,840	-		Ga0059261_3448	0.68	-0.8
3,574,893	+		Ga0059261_3448	0.81	-0.8
3,574,893	+		Ga0059261_3448	0.81	-1.2
3,574,893	+		Ga0059261_3448	0.81	+0.3
3,574,893	+		Ga0059261_3448	0.81	-0.4
3,574,893	+		Ga0059261_3448	0.81	-0.9
3,574,894	-		Ga0059261_3448	0.81	-0.2
3,574,894	-		Ga0059261_3448	0.81	+0.5
3,574,894	-		Ga0059261_3448	0.81	+0.4
3,574,894	-		Ga0059261_3448	0.81	-0.2
3,574,894	-		Ga0059261_3448	0.81	+1.4
3,574,935	+				+0.6
3,574,936	+				-0.7
3,574,936	+				+1.1
3,574,936	+				+0.9
3,574,937	-				+0.5
3,574,937	-				+0.2
3,575,072	+		Ga0059261_3449	0.12	-1.3
3,575,072	+		Ga0059261_3449	0.12	-0.6
3,575,073	-		Ga0059261_3449	0.12	-2.0
3,575,073	-		Ga0059261_3449	0.12	-1.2
3,575,111	-		Ga0059261_3449	0.20	+0.4
3,575,231	+		Ga0059261_3449	0.44	+1.6
3,575,231	+		Ga0059261_3449	0.44	-0.8
3,575,231	+		Ga0059261_3449	0.44	+0.3
3,575,232	-		Ga0059261_3449	0.44	+1.0
3,575,232	-				+2.9
3,575,327	-		Ga0059261_3449	0.63	-0.4
3,575,398	+		Ga0059261_3449	0.77	-0.1
3,575,398	+		Ga0059261_3449	0.77	-0.4
3,575,399	-		Ga0059261_3449	0.77	-0.7
3,575,399	-		Ga0059261_3449	0.77	+0.5
3,575,399	-		Ga0059261_3449	0.77	-0.2
3,575,399	-		Ga0059261_3449	0.77	+0.6
3,575,399	-		Ga0059261_3449	0.77	+0.2
3,575,401	+		Ga0059261_3449	0.78	-0.4
3,575,401	+		Ga0059261_3449	0.78	-0.2
3,575,401	+		Ga0059261_3449	0.78	-0.3
3,575,402	-		Ga0059261_3449	0.78	-0.8
3,575,402	-		Ga0059261_3449	0.78	+0.1
3,575,402	-		Ga0059261_3449	0.78	-0.8
3,575,402	-		Ga0059261_3449	0.78	+0.2
3,575,402	-		Ga0059261_3449	0.78	+0.4
3,575,524	+				+0.4
3,575,524	+				+0.3
3,575,524	+				+0.3
3,575,524	+				-0.1
3,575,524	+				+0.0
3,575,524	+				-0.5
3,575,525	-				+1.4
3,575,525	-				+1.2
3,575,525	-				+0.4
3,575,525	-				-0.5
3,575,525	-				+0.5
3,575,557	+				+0.4
3,575,558	-				-1.0
3,575,575	+		Ga0059261_3450	0.12	-1.0
3,575,575	+		Ga0059261_3450	0.12	-0.4
3,575,576	-		Ga0059261_3450	0.12	-0.6
3,575,576	-		Ga0059261_3450	0.12	+0.6
3,575,576	-		Ga0059261_3450	0.12	+0.5
3,575,578	+		Ga0059261_3450	0.13	+0.4
3,575,578	+		Ga0059261_3450	0.13	+0.6
3,575,578	+		Ga0059261_3450	0.13	-0.5
3,575,578	+		Ga0059261_3450	0.13	-0.1
3,575,579	-		Ga0059261_3450	0.13	-0.0
3,575,579	-		Ga0059261_3450	0.13	+0.7
3,575,579	-		Ga0059261_3450	0.13	+0.7
3,575,579	-		Ga0059261_3450	0.13	-0.2
3,575,620	+		Ga0059261_3450	0.26	+0.8
3,575,620	+		Ga0059261_3450	0.26	-0.7
3,575,620	+		Ga0059261_3450	0.26	-0.3
3,575,620	+		Ga0059261_3450	0.26	-2.0
3,575,621	-		Ga0059261_3450	0.26	-0.6
3,575,621	-		Ga0059261_3450	0.26	+0.7
3,575,621	-		Ga0059261_3450	0.26	-0.1
3,575,621	-				+0.8
3,575,621	-		Ga0059261_3450	0.26	+0.6
3,575,767	+		Ga0059261_3450	0.71	-0.1
3,575,767	+		Ga0059261_3450	0.71	+0.4
3,575,768	-		Ga0059261_3450	0.71	+0.0
3,575,768	-		Ga0059261_3450	0.71	-0.4
3,575,768	-		Ga0059261_3450	0.71	-0.3
3,575,794	+		Ga0059261_3450	0.79	-0.2
3,575,794	+		Ga0059261_3450	0.79	-0.1
3,575,795	-		Ga0059261_3450	0.79	-0.6
3,575,861	-				-0.4
3,576,106	+		Ga0059261_3451	0.58	-1.7
3,576,107	-		Ga0059261_3451	0.59	+0.0
3,576,107	-		Ga0059261_3451	0.59	-0.3
3,576,265	+				-0.1
3,576,266	-				-0.5
3,576,266	-				+0.5
3,576,272	+				-0.5
3,576,272	+				+0.9
3,576,272	+				-0.5
3,576,272	+				+0.7
3,576,273	-				+0.1
3,576,273	-				+0.8
3,576,273	-				-0.2
3,576,506	+				+0.5
3,576,506	+				+2.4
3,576,507	-				+0.0
3,576,507	-				-0.2
3,576,507	-				-1.2
3,576,862	+				+0.4