Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3436

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
3,561,639	+		Ga0059261_3434	0.83	-0.0
3,561,640	-		Ga0059261_3434	0.84	+0.9
3,561,640	-		Ga0059261_3434	0.84	+0.0
3,561,640	-		Ga0059261_3434	0.84	-2.0
3,561,654	+		Ga0059261_3434	0.86	+3.4
3,561,655	-		Ga0059261_3434	0.86	-0.2
3,561,665	-		Ga0059261_3434	0.88	-0.4
3,561,726	+				+0.3
3,561,726	+				-0.6
3,561,726	+				+0.0
3,561,726	+				+0.2
3,561,726	+				+0.1
3,561,727	-				+0.4
3,561,727	-				-1.1
3,561,731	+				-0.9
3,561,731	+				+0.4
3,561,731	+				+0.5
3,561,731	+				+0.3
3,561,731	+				-0.3
3,561,731	+				+1.1
3,561,731	+				+0.1
3,561,731	+				+0.6
3,561,731	+				+2.4
3,561,731	+				-0.4
3,561,731	+				-0.6
3,561,732	-				-0.2
3,561,732	-				-1.4
3,561,732	-				+0.6
3,561,732	-				-0.3
3,561,732	-				-0.2
3,561,732	-				-1.0
3,561,765	+				+0.2
3,561,765	+				+1.4
3,561,765	+				+0.5
3,561,766	-				-0.1
3,561,766	-				+0.4
3,561,766	-				-0.6
3,561,888	+		Ga0059261_3435	0.19	+0.2
3,561,888	+		Ga0059261_3435	0.19	-0.3
3,561,888	+		Ga0059261_3435	0.19	+0.4
3,561,888	+		Ga0059261_3435	0.19	-0.3
3,561,888	+		Ga0059261_3435	0.19	+0.0
3,561,889	-		Ga0059261_3435	0.19	-1.3
3,562,336	+		Ga0059261_3435	0.71	-0.4
3,562,337	-		Ga0059261_3435	0.71	+0.8
3,562,338	+		Ga0059261_3435	0.71	+2.2
3,562,338	+		Ga0059261_3435	0.71	+0.2
3,562,338	+		Ga0059261_3435	0.71	+0.8
3,562,338	+		Ga0059261_3435	0.71	+0.4
3,562,338	+		Ga0059261_3435	0.71	-0.4
3,562,338	+		Ga0059261_3435	0.71	-0.6
3,562,338	+		Ga0059261_3435	0.71	-0.4
3,562,338	+		Ga0059261_3435	0.71	-1.6
3,562,338	+		Ga0059261_3435	0.71	-1.2
3,562,338	+		Ga0059261_3435	0.71	+0.8
3,562,339	-		Ga0059261_3435	0.72	-1.7
3,562,339	-		Ga0059261_3435	0.72	+0.8
3,562,339	-		Ga0059261_3435	0.72	+0.0
3,562,339	-		Ga0059261_3435	0.72	-0.2
3,562,339	-		Ga0059261_3435	0.72	-1.1
3,562,339	-				+0.4
3,562,339	-		Ga0059261_3435	0.72	-0.1
3,562,339	-				+0.4
3,562,339	-		Ga0059261_3435	0.72	+0.3
3,562,339	-		Ga0059261_3435	0.72	-0.2
3,562,339	-		Ga0059261_3435	0.72	-0.5
3,562,339	-		Ga0059261_3435	0.72	-0.2
3,562,339	-		Ga0059261_3435	0.72	-0.1
3,562,339	-		Ga0059261_3435	0.72	-1.0
3,562,510	-				-0.0
3,562,704	+		Ga0059261_3436	0.27	+0.9
3,562,705	-		Ga0059261_3436	0.27	-0.1
3,562,727	+		Ga0059261_3436	0.32	+0.3
3,562,727	+		Ga0059261_3436	0.32	+0.1
3,562,727	+		Ga0059261_3436	0.32	+0.1
3,562,727	+		Ga0059261_3436	0.32	+0.0
3,562,727	+		Ga0059261_3436	0.32	+1.1
3,562,727	+		Ga0059261_3436	0.32	+1.4
3,562,727	+		Ga0059261_3436	0.32	+0.2
3,562,727	+		Ga0059261_3436	0.32	-0.7
3,562,727	+		Ga0059261_3436	0.32	-0.4
3,562,728	-		Ga0059261_3436	0.32	+0.5
3,562,728	-		Ga0059261_3436	0.32	-0.4
3,562,728	-		Ga0059261_3436	0.32	-0.2
3,562,728	-		Ga0059261_3436	0.32	-1.6
3,562,728	-		Ga0059261_3436	0.32	+0.5
3,562,841	+		Ga0059261_3436	0.56	+0.5
3,562,841	+				+0.4
3,562,841	+		Ga0059261_3436	0.56	+0.5
3,562,841	+		Ga0059261_3436	0.56	+1.7
3,562,841	+		Ga0059261_3436	0.56	+0.0
3,562,841	+		Ga0059261_3436	0.56	+0.9
3,562,841	+		Ga0059261_3436	0.56	-0.8
3,562,841	+		Ga0059261_3436	0.56	+0.6
3,562,841	+		Ga0059261_3436	0.56	-1.2
3,562,842	-		Ga0059261_3436	0.56	-0.0
3,562,842	-		Ga0059261_3436	0.56	+0.1
3,562,842	-		Ga0059261_3436	0.56	-0.5
3,562,842	-		Ga0059261_3436	0.56	+1.0
3,562,842	-		Ga0059261_3436	0.56	+0.2
3,562,842	-		Ga0059261_3436	0.56	+0.0
3,562,842	-		Ga0059261_3436	0.56	+0.1
3,562,842	-		Ga0059261_3436	0.56	-0.4
3,563,263	+		Ga0059261_3437	0.19	+0.4
3,563,576	+				-0.6
3,563,577	-				-0.6
3,563,595	+				+0.7
3,563,596	-				+1.1
3,563,596	-				+0.5
3,563,596	-				-0.6
3,563,606	+				-0.8
3,563,606	+				+1.4
3,563,606	+				-0.6
3,563,606	+				+0.5
3,563,606	+				-0.4
3,563,606	+				+0.2
3,563,606	+				-0.2
3,563,607	-				-0.9
3,563,607	-				+0.4
3,563,607	-				-1.2
3,563,619	+				+1.9
3,563,619	+				-0.1
3,563,619	+				-0.1
3,563,619	+				-0.6
3,563,619	+				+0.5
3,563,619	+				+0.4
3,563,619	+				-0.3
3,563,619	+				-0.7
3,563,620	-				+0.5
3,563,620	-				-0.5
3,563,620	-				+0.4