Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1739

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
1,843,795	+		Ga0059261_1738	0.71	+0.3
1,843,795	+		Ga0059261_1738	0.71	-0.9
1,843,795	+		Ga0059261_1738	0.71	+0.7
1,843,795	+		Ga0059261_1738	0.71	-0.4
1,843,796	-				-0.5
1,843,796	-		Ga0059261_1738	0.71	-0.1
1,843,796	-		Ga0059261_1738	0.71	+0.9
1,843,796	-		Ga0059261_1738	0.71	+0.2
1,843,796	-		Ga0059261_1738	0.71	+0.1
1,843,837	+		Ga0059261_1738	0.73	-0.3
1,843,837	+		Ga0059261_1738	0.73	-1.5
1,843,837	+		Ga0059261_1738	0.73	+0.6
1,843,838	-		Ga0059261_1738	0.73	-0.0
1,844,321	+		Ga0059261_1738	0.90	-0.4
1,844,321	+		Ga0059261_1738	0.90	-0.1
1,844,321	+		Ga0059261_1738	0.90	+0.6
1,844,322	-		Ga0059261_1738	0.90	-1.6
1,844,322	-		Ga0059261_1738	0.90	-0.0
1,844,343	+				+0.6
1,844,438	-				-0.1
1,844,535	+				+0.1
1,844,536	-				-0.0
1,844,598	+				-0.8
1,844,599	-				+0.8
1,844,624	+				-0.4
1,844,653	+				+0.1
1,844,653	+				+0.2
1,844,653	+				+0.1
1,844,654	-				+0.4
1,844,654	-				-0.7
1,844,655	+				+0.1
1,844,656	-				-0.1
1,844,656	-				+0.1
1,844,722	-				-0.8
1,844,798	+				-0.5
1,844,798	+				-0.1
1,844,798	+				+0.5
1,844,799	-				+0.2
1,844,799	-				+0.3
1,844,799	-				-0.2
1,844,841	+		Ga0059261_1739	0.19	+0.2
1,844,841	+		Ga0059261_1739	0.19	+0.7
1,844,842	-		Ga0059261_1739	0.19	-0.1
1,844,842	-		Ga0059261_1739	0.19	+0.5
1,844,842	-		Ga0059261_1739	0.19	+1.5
1,844,842	-		Ga0059261_1739	0.19	+0.9
1,844,842	-		Ga0059261_1739	0.19	-1.4
1,844,842	-		Ga0059261_1739	0.19	-0.2
1,845,318	+				-1.2
1,845,318	+				-0.2
1,845,318	+				+0.4
1,845,318	+				-0.3
1,845,318	+				+0.8
1,845,319	-				+0.8
1,845,319	-				-1.8
1,845,319	-				-0.1
1,845,353	+				-0.5
1,845,353	+				+0.1
1,845,353	+				+0.6
1,845,353	+				+0.5
1,845,353	+				-0.2
1,845,353	+				+0.6
1,845,353	+				-0.3
1,845,353	+				-0.5
1,845,353	+				+1.5
1,845,354	-				-0.1
1,845,354	-				+0.2
1,845,354	-				-0.7
1,845,354	-				-0.5
1,845,354	-				+0.5
1,845,354	-				-0.4
1,845,354	-				-0.5
1,845,354	-				+0.7
1,845,354	-				+1.5
1,845,386	+				-0.5
1,845,386	+				-0.3
1,845,386	+				-0.2
1,845,386	+				-0.1
1,845,386	+				+0.4
1,845,386	+				+1.7
1,845,386	+				-0.5
1,845,387	-				-0.0
1,845,387	-				+0.1
1,845,387	-				+0.9
1,845,387	-				-0.2
1,845,387	-				-1.5
1,845,387	-				+0.2
1,845,387	-				-0.6
1,845,387	-				-0.3
1,845,426	-				-0.6
1,845,426	-				-0.5
1,845,464	+				-0.5
1,845,464	+				+0.2
1,845,464	+				-0.4
1,845,464	+				-0.6
1,845,465	-				+0.7
1,845,465	-				-1.0
1,845,465	-				+0.0
1,845,550	+				+0.3
1,845,550	+				+0.2
1,845,557	+				-0.3
1,845,557	+				-1.0
1,845,557	+				-0.1
1,845,557	+				-0.5
1,845,557	+				+1.2
1,845,558	-				+0.0
1,845,558	-				-0.9
1,845,558	-				+0.2
1,845,558	-				+0.0
1,845,558	-				+0.4
1,845,558	-				-0.8
1,845,558	-				+0.4
1,845,558	-				-0.6
1,845,571	+				+0.5
1,845,571	+				-0.6
1,845,571	+				+0.9
1,845,572	-				-1.2
1,845,572	-				-0.3
1,845,600	+				-0.2
1,845,600	+				-1.4
1,845,600	+				-0.2
1,845,600	+				-0.1
1,845,600	+				-1.1
1,845,601	-				-0.5
1,845,601	-				+1.5
1,845,601	-				+0.8
1,845,611	+				+0.5
1,845,611	+				+0.9
1,845,611	+				-0.4
1,845,612	-				+0.6
1,845,612	-				+0.4
1,845,612	-				-0.2
1,845,612	-				+0.5
1,845,634	-				-1.6
1,845,662	+				+0.1
1,845,662	+				-0.4
1,845,663	-				+0.5
1,845,663	-				-0.3
1,845,663	-				-0.0
1,845,671	+				+0.2
1,845,671	+				+0.9
1,845,671	+				+0.4
1,845,671	+				+0.2
1,845,672	-				-0.4
1,845,686	+				+0.0
1,845,686	+				-1.0
1,845,686	+				-0.5
1,845,686	+				-0.0
1,845,687	-				-0.5
1,845,687	-				-0.2
1,845,687	-				-0.2
1,845,831	+		Ga0059261_1741	0.10	+0.2
1,845,831	+		Ga0059261_1741	0.10	+0.5
1,845,832	-		Ga0059261_1741	0.11	+0.9
1,845,832	-		Ga0059261_1741	0.11	-0.1
1,845,887	+		Ga0059261_1741	0.35	+0.7
1,845,888	-		Ga0059261_1741	0.36	-0.6
1,845,888	-		Ga0059261_1741	0.36	+0.7
1,845,888	-		Ga0059261_1741	0.36	-1.3
1,845,897	+		Ga0059261_1741	0.40	+0.1
1,845,977	+		Ga0059261_1741	0.75	-0.4
1,845,977	+		Ga0059261_1741	0.75	-0.8
1,845,977	+		Ga0059261_1741	0.75	-1.8
1,845,977	+		Ga0059261_1741	0.75	+0.3
1,845,978	-		Ga0059261_1741	0.76	+0.1
1,845,978	-		Ga0059261_1741	0.76	+0.3
1,845,978	-		Ga0059261_1741	0.76	-0.0
1,845,978	-		Ga0059261_1741	0.76	-0.9
1,845,978	-		Ga0059261_1741	0.76	+0.2
1,846,069	+				-0.1
1,846,069	+				+0.0
1,846,069	+				-0.5
1,846,077	+				+3.8
1,846,077	+				-0.1
1,846,077	+				-0.5
1,846,077	+				-0.2
1,846,077	+				-0.8
1,846,077	+				+0.4
1,846,078	-				+0.4
1,846,078	-				-0.2
1,846,078	-				-0.0
1,846,078	-				+0.2