Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1735

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
1,838,010	+				+0.1
1,838,011	-				+0.5
1,838,011	-				-0.1
1,838,011	-				-0.1
1,838,036	+				+0.5
1,838,037	-				-0.8
1,838,037	-				-0.3
1,838,080	+				-1.1
1,838,080	+				-0.0
1,838,080	+				+0.3
1,838,081	-				+1.0
1,838,081	-				+0.5
1,838,081	-				-0.5
1,838,081	-				+0.2
1,838,101	+				-0.8
1,838,101	+				-0.1
1,838,101	+				-0.4
1,838,101	+				-0.5
1,838,101	+				-0.8
1,838,101	+				-0.9
1,838,101	+				+0.3
1,838,101	+				+0.2
1,838,101	+				-0.6
1,838,101	+				-0.2
1,838,101	+				-0.7
1,838,101	+				+0.5
1,838,101	+				+0.7
1,838,101	+				-0.1
1,838,101	+				-0.4
1,838,101	+				+0.2
1,838,101	+				+0.3
1,838,101	+				-0.3
1,838,101	+				+0.2
1,838,101	+				-0.1
1,838,101	+				-0.7
1,838,101	+				+1.0
1,838,101	+				-0.2
1,838,101	+				+0.1
1,838,101	+				+0.0
1,838,101	+				+0.2
1,838,101	+				+1.1
1,838,101	+				-0.7
1,838,102	-				+0.9
1,838,102	-				-0.2
1,838,102	-				+1.2
1,838,102	-				-1.7
1,838,102	-				-0.3
1,838,102	-				-0.9
1,838,102	-				+2.5
1,838,102	-				+0.6
1,838,102	-				-0.3
1,838,102	-				-0.7
1,838,102	-				+0.4
1,838,102	-				+0.5
1,838,102	-				+0.5
1,838,102	-				-0.8
1,838,102	-				-0.2
1,838,102	-				-0.2
1,838,102	-				+0.9
1,838,102	-				+0.5
1,838,102	-				+1.5
1,838,132	+				-1.1
1,838,132	+				-0.4
1,838,133	-				+1.5
1,838,133	-				+0.7
1,838,133	-				+1.4
1,838,133	-				-0.1
1,838,133	-				+0.3
1,838,133	-				+0.5
1,838,133	-				+0.1
1,838,392	+				-0.2
1,838,392	+				+0.2
1,838,392	+				+0.9
1,838,392	+				+0.2
1,838,392	+				-1.3
1,838,392	+				+0.7
1,838,392	+				-0.4
1,838,393	-				+1.9
1,838,393	-				-0.6
1,838,393	-				+1.1
1,838,393	-				-1.0
1,838,393	-				-0.2
1,838,393	-				+0.5
1,838,393	-				-0.5
1,838,393	-				+0.6
1,838,393	-				+0.1
1,838,393	-				+0.1
1,838,470	+		Ga0059261_1734	0.16	-0.4
1,838,470	+		Ga0059261_1734	0.16	+0.9
1,838,470	+		Ga0059261_1734	0.16	-0.2
1,838,470	+		Ga0059261_1734	0.16	+0.2
1,838,470	+		Ga0059261_1734	0.16	-0.3
1,838,471	-		Ga0059261_1734	0.16	-0.1
1,838,533	+				+0.5
1,838,533	+		Ga0059261_1734	0.29	-0.7
1,838,533	+		Ga0059261_1734	0.29	-0.5
1,838,533	+		Ga0059261_1734	0.29	+0.1
1,838,533	+		Ga0059261_1734	0.29	+0.0
1,838,533	+				+1.5
1,838,533	+		Ga0059261_1734	0.29	+0.1
1,838,533	+				-0.5
1,838,533	+		Ga0059261_1734	0.29	-0.7
1,838,533	+		Ga0059261_1734	0.29	+0.3
1,838,533	+		Ga0059261_1734	0.29	+0.7
1,838,533	+		Ga0059261_1734	0.29	-0.7
1,838,533	+		Ga0059261_1734	0.29	-1.2
1,838,533	+		Ga0059261_1734	0.29	-0.8
1,838,533	+		Ga0059261_1734	0.29	+0.1
1,838,533	+		Ga0059261_1734	0.29	-0.2
1,838,534	-		Ga0059261_1734	0.29	+0.4
1,838,534	-		Ga0059261_1734	0.29	-0.1
1,838,534	-		Ga0059261_1734	0.29	+0.0
1,838,534	-		Ga0059261_1734	0.29	+0.1
1,838,534	-		Ga0059261_1734	0.29	+0.0
1,838,534	-		Ga0059261_1734	0.29	+0.1
1,838,534	-		Ga0059261_1734	0.29	+0.4
1,838,534	-		Ga0059261_1734	0.29	+0.2
1,838,534	-		Ga0059261_1734	0.29	-1.5
1,838,534	-		Ga0059261_1734	0.29	-0.0
1,838,534	-		Ga0059261_1734	0.29	-0.5
1,838,534	-		Ga0059261_1734	0.29	+0.4
1,838,534	-		Ga0059261_1734	0.29	+0.1
1,838,534	-		Ga0059261_1734	0.29	+0.4
1,838,569	+		Ga0059261_1734	0.36	-0.5
1,838,569	+		Ga0059261_1734	0.36	+0.6
1,838,569	+		Ga0059261_1734	0.36	+0.3
1,838,569	+		Ga0059261_1734	0.36	+1.3
1,838,569	+		Ga0059261_1734	0.36	+0.5
1,838,569	+		Ga0059261_1734	0.36	-0.8
1,838,569	+		Ga0059261_1734	0.36	-0.2
1,838,570	-		Ga0059261_1734	0.36	+0.2
1,838,570	-		Ga0059261_1734	0.36	-1.0
1,838,616	+		Ga0059261_1734	0.45	+0.9
1,838,616	+		Ga0059261_1734	0.45	-0.1
1,838,617	-		Ga0059261_1734	0.46	-0.4
1,838,617	-		Ga0059261_1734	0.46	+0.7
1,838,617	-		Ga0059261_1734	0.46	+0.7
1,838,617	-		Ga0059261_1734	0.46	-0.1
1,838,617	-		Ga0059261_1734	0.46	+0.3
1,838,617	-		Ga0059261_1734	0.46	-1.0
1,838,617	-		Ga0059261_1734	0.46	+0.2
1,838,651	+		Ga0059261_1734	0.53	-0.5
1,838,651	+		Ga0059261_1734	0.53	+0.5
1,838,652	-		Ga0059261_1734	0.53	+0.2
1,838,652	-		Ga0059261_1734	0.53	-0.4
1,838,652	-		Ga0059261_1734	0.53	+0.4
1,838,652	-		Ga0059261_1734	0.53	+0.1
1,838,660	+		Ga0059261_1734	0.54	+0.5
1,838,660	+		Ga0059261_1734	0.54	+0.4
1,838,661	-		Ga0059261_1734	0.55	-0.7
1,838,661	-		Ga0059261_1734	0.55	+1.5
1,838,661	-		Ga0059261_1734	0.55	-0.6
1,838,711	+		Ga0059261_1734	0.65	+2.5
1,838,711	+		Ga0059261_1734	0.65	+0.2
1,838,712	-		Ga0059261_1734	0.65	+0.3
1,838,712	-		Ga0059261_1734	0.65	-0.2
1,838,712	-		Ga0059261_1734	0.65	+0.3
1,838,712	-		Ga0059261_1734	0.65	-1.9
1,838,742	+		Ga0059261_1734	0.71	-0.4
1,838,742	+		Ga0059261_1734	0.71	-0.1
1,838,743	-		Ga0059261_1734	0.71	+0.2
1,838,743	-		Ga0059261_1734	0.71	+0.7
1,838,867	+				-1.1
1,838,867	+				+0.3
1,838,868	-				+0.0
1,838,868	-				+0.0
1,838,869	+				-1.3
1,838,869	+				+0.4
1,838,869	+				+0.5
1,838,919	-				-0.3