Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0623 and Ga0059261_0624 overlap by 7 nucleotides Ga0059261_0624 and Ga0059261_0625 overlap by 1 nucleotides Ga0059261_0625 and Ga0059261_0626 overlap by 4 nucleotides Ga0059261_0626 and Ga0059261_0627 overlap by 4 nucleotides
Ga0059261_0623: Ga0059261_0623 - ABC-type Fe3+-siderophore transport system, permease component, at 663,374 to 664,369
_0623
Ga0059261_0624: Ga0059261_0624 - ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components, at 664,363 to 665,151
_0624
Ga0059261_0625: Ga0059261_0625 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21), at 665,151 to 666,164
_0625
Ga0059261_0626: Ga0059261_0626 - Fructose-2,6-bisphosphatase, at 666,161 to 666,730
_0626
Ga0059261_0627: Ga0059261_0627 - cobalamin-5'-phosphate synthase (EC 2.7.8.26), at 666,727 to 667,443
_0627
Position (kb) 665
666
667 Strain fitness (log2 ratio) -1
0
1 at 664.362 kb on + strand at 664.362 kb on + strand at 664.499 kb on + strand at 664.499 kb on + strand, within Ga0059261_0624 at 664.499 kb on + strand, within Ga0059261_0624 at 664.499 kb on + strand, within Ga0059261_0624 at 664.499 kb on + strand, within Ga0059261_0624 at 664.499 kb on + strand, within Ga0059261_0624 at 664.500 kb on - strand, within Ga0059261_0624 at 664.500 kb on - strand, within Ga0059261_0624 at 664.500 kb on - strand, within Ga0059261_0624 at 664.536 kb on + strand, within Ga0059261_0624 at 664.536 kb on + strand, within Ga0059261_0624 at 664.600 kb on + strand, within Ga0059261_0624 at 664.600 kb on + strand, within Ga0059261_0624 at 664.600 kb on + strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.601 kb on - strand, within Ga0059261_0624 at 664.972 kb on + strand, within Ga0059261_0624 at 664.973 kb on - strand, within Ga0059261_0624 at 665.065 kb on + strand, within Ga0059261_0624 at 665.065 kb on + strand, within Ga0059261_0624 at 665.066 kb on - strand, within Ga0059261_0624 at 665.066 kb on - strand, within Ga0059261_0624 at 665.066 kb on - strand, within Ga0059261_0624 at 665.066 kb on - strand, within Ga0059261_0624 at 665.145 kb on + strand at 665.146 kb on - strand at 665.146 kb on - strand at 665.146 kb on - strand at 665.146 kb on - strand at 665.146 kb on - strand at 665.648 kb on + strand, within Ga0059261_0625 at 665.648 kb on + strand, within Ga0059261_0625 at 665.648 kb on + strand, within Ga0059261_0625 at 665.648 kb on + strand, within Ga0059261_0625 at 665.648 kb on + strand, within Ga0059261_0625 at 665.649 kb on - strand, within Ga0059261_0625 at 665.649 kb on - strand, within Ga0059261_0625 at 665.738 kb on + strand, within Ga0059261_0625 at 666.179 kb on + strand at 666.179 kb on + strand at 666.180 kb on - strand at 666.180 kb on - strand at 666.180 kb on - strand at 666.180 kb on - strand at 666.180 kb on - strand at 666.180 kb on - strand at 666.256 kb on + strand, within Ga0059261_0626 at 666.257 kb on - strand, within Ga0059261_0626 at 666.257 kb on - strand, within Ga0059261_0626 at 666.656 kb on + strand, within Ga0059261_0626 at 666.656 kb on + strand, within Ga0059261_0626 at 666.657 kb on - strand, within Ga0059261_0626 at 666.885 kb on + strand, within Ga0059261_0627
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium acetate 5 mM remove 664,362 + +0.3 664,362 + -0.2 664,499 + -0.9 664,499 + Ga0059261_0624 0.17 -0.0 664,499 + Ga0059261_0624 0.17 -0.6 664,499 + Ga0059261_0624 0.17 -0.4 664,499 + Ga0059261_0624 0.17 +0.6 664,499 + Ga0059261_0624 0.17 -1.4 664,500 - Ga0059261_0624 0.17 -1.4 664,500 - Ga0059261_0624 0.17 -1.2 664,500 - Ga0059261_0624 0.17 +0.1 664,536 + Ga0059261_0624 0.22 -1.7 664,536 + Ga0059261_0624 0.22 +0.8 664,600 + Ga0059261_0624 0.30 -1.0 664,600 + Ga0059261_0624 0.30 -1.0 664,600 + Ga0059261_0624 0.30 -1.0 664,601 - Ga0059261_0624 0.30 +1.1 664,601 - Ga0059261_0624 0.30 -0.3 664,601 - Ga0059261_0624 0.30 -0.1 664,601 - Ga0059261_0624 0.30 -0.7 664,601 - Ga0059261_0624 0.30 -0.9 664,601 - Ga0059261_0624 0.30 -0.5 664,972 + Ga0059261_0624 0.77 +0.2 664,973 - Ga0059261_0624 0.77 -0.6 665,065 + Ga0059261_0624 0.89 +0.1 665,065 + Ga0059261_0624 0.89 -0.8 665,066 - Ga0059261_0624 0.89 -0.8 665,066 - Ga0059261_0624 0.89 -0.2 665,066 - Ga0059261_0624 0.89 +1.1 665,066 - Ga0059261_0624 0.89 -0.9 665,145 + -0.5 665,146 - -0.1 665,146 - +0.7 665,146 - +0.1 665,146 - +0.0 665,146 - -0.2 665,648 + Ga0059261_0625 0.49 -0.1 665,648 + Ga0059261_0625 0.49 +0.8 665,648 + Ga0059261_0625 0.49 -0.7 665,648 + Ga0059261_0625 0.49 -1.0 665,648 + Ga0059261_0625 0.49 -0.4 665,649 - Ga0059261_0625 0.49 -0.2 665,649 - Ga0059261_0625 0.49 -0.2 665,738 + Ga0059261_0625 0.58 -0.5 666,179 + +0.1 666,179 + -0.9 666,180 - -0.8 666,180 - +1.4 666,180 - +0.0 666,180 - -0.2 666,180 - -0.9 666,180 - +0.7 666,256 + Ga0059261_0626 0.17 +1.4 666,257 - Ga0059261_0626 0.17 -0.2 666,257 - Ga0059261_0626 0.17 -0.8 666,656 + Ga0059261_0626 0.87 -0.8 666,656 + Ga0059261_0626 0.87 -0.1 666,657 - Ga0059261_0626 0.87 +1.1 666,885 + Ga0059261_0627 0.22 +0.2
Or see this region's nucleotide sequence