Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0406 and Ga0059261_0407 are separated by 576 nucleotides Ga0059261_0407 and Ga0059261_0408 are separated by 531 nucleotides
Ga0059261_0406: Ga0059261_0406 - Predicted transcriptional regulators, at 388,927 to 389,274
_0406
Ga0059261_0407: Ga0059261_0407 - hypothetical protein, at 389,851 to 390,432
_0407
Ga0059261_0408: Ga0059261_0408 - Predicted transcriptional regulators, at 390,964 to 392,772
_0408
Position (kb) 389
390
391 Strain fitness (log2 ratio) -1
0
1 at 389.016 kb on - strand, within Ga0059261_0406 at 389.016 kb on - strand, within Ga0059261_0406 at 389.127 kb on + strand, within Ga0059261_0406 at 389.127 kb on + strand, within Ga0059261_0406 at 389.127 kb on + strand, within Ga0059261_0406 at 389.127 kb on + strand, within Ga0059261_0406 at 389.127 kb on + strand, within Ga0059261_0406 at 389.127 kb on + strand, within Ga0059261_0406 at 389.127 kb on + strand, within Ga0059261_0406 at 389.127 kb on + strand, within Ga0059261_0406 at 389.127 kb on + strand, within Ga0059261_0406 at 389.128 kb on - strand, within Ga0059261_0406 at 389.128 kb on - strand, within Ga0059261_0406 at 389.128 kb on - strand, within Ga0059261_0406 at 389.128 kb on - strand, within Ga0059261_0406 at 389.128 kb on - strand, within Ga0059261_0406 at 389.128 kb on - strand, within Ga0059261_0406 at 389.128 kb on - strand at 389.128 kb on - strand, within Ga0059261_0406 at 389.128 kb on - strand, within Ga0059261_0406 at 389.128 kb on - strand, within Ga0059261_0406 at 389.179 kb on + strand, within Ga0059261_0406 at 389.179 kb on + strand, within Ga0059261_0406 at 389.180 kb on - strand, within Ga0059261_0406 at 389.214 kb on + strand, within Ga0059261_0406 at 389.324 kb on + strand at 389.378 kb on - strand at 389.426 kb on + strand at 389.426 kb on + strand at 389.449 kb on - strand at 389.450 kb on + strand at 389.524 kb on + strand at 389.524 kb on + strand at 389.524 kb on + strand at 389.524 kb on + strand at 389.524 kb on + strand at 389.524 kb on + strand at 389.524 kb on + strand at 389.525 kb on - strand at 389.525 kb on - strand at 389.525 kb on - strand at 389.525 kb on - strand at 389.525 kb on - strand at 389.579 kb on - strand at 389.579 kb on - strand at 389.718 kb on - strand at 389.718 kb on - strand at 389.718 kb on - strand at 389.718 kb on - strand at 389.731 kb on - strand at 389.777 kb on + strand at 389.777 kb on + strand at 389.778 kb on - strand at 389.828 kb on + strand at 389.828 kb on + strand at 389.829 kb on - strand at 389.840 kb on + strand at 389.840 kb on + strand at 389.841 kb on - strand at 389.920 kb on + strand, within Ga0059261_0407 at 389.920 kb on + strand, within Ga0059261_0407 at 389.920 kb on + strand, within Ga0059261_0407 at 389.921 kb on - strand, within Ga0059261_0407 at 390.017 kb on - strand, within Ga0059261_0407 at 390.017 kb on - strand, within Ga0059261_0407 at 390.045 kb on + strand, within Ga0059261_0407 at 390.045 kb on + strand, within Ga0059261_0407 at 390.045 kb on + strand, within Ga0059261_0407 at 390.046 kb on - strand, within Ga0059261_0407 at 390.046 kb on - strand, within Ga0059261_0407 at 390.046 kb on - strand, within Ga0059261_0407 at 390.046 kb on - strand, within Ga0059261_0407 at 390.046 kb on - strand, within Ga0059261_0407 at 390.086 kb on - strand, within Ga0059261_0407 at 390.170 kb on + strand, within Ga0059261_0407 at 390.171 kb on - strand, within Ga0059261_0407 at 390.171 kb on - strand, within Ga0059261_0407 at 390.171 kb on - strand, within Ga0059261_0407 at 390.178 kb on + strand, within Ga0059261_0407 at 390.205 kb on + strand at 390.206 kb on - strand, within Ga0059261_0407 at 390.211 kb on + strand, within Ga0059261_0407 at 390.211 kb on + strand, within Ga0059261_0407 at 390.211 kb on + strand, within Ga0059261_0407 at 390.211 kb on + strand, within Ga0059261_0407 at 390.211 kb on + strand, within Ga0059261_0407 at 390.212 kb on - strand, within Ga0059261_0407 at 390.212 kb on - strand, within Ga0059261_0407 at 390.212 kb on - strand, within Ga0059261_0407 at 390.212 kb on - strand, within Ga0059261_0407 at 390.212 kb on - strand, within Ga0059261_0407 at 390.212 kb on - strand, within Ga0059261_0407 at 390.344 kb on + strand, within Ga0059261_0407 at 390.345 kb on - strand, within Ga0059261_0407 at 390.417 kb on + strand at 390.471 kb on + strand at 390.481 kb on + strand at 390.481 kb on + strand at 390.482 kb on - strand at 390.541 kb on + strand at 390.541 kb on + strand at 390.541 kb on + strand at 390.541 kb on + strand at 390.541 kb on + strand at 390.541 kb on + strand at 390.542 kb on - strand at 390.542 kb on - strand at 390.542 kb on - strand at 390.542 kb on - strand at 390.542 kb on - strand at 390.613 kb on + strand at 390.613 kb on + strand at 390.626 kb on + strand at 390.626 kb on + strand at 390.626 kb on + strand at 390.626 kb on + strand at 390.627 kb on - strand at 390.627 kb on - strand at 390.627 kb on - strand at 390.627 kb on - strand at 390.627 kb on - strand at 390.627 kb on - strand at 390.658 kb on + strand at 390.658 kb on + strand at 390.658 kb on + strand at 390.658 kb on + strand at 390.658 kb on + strand at 390.658 kb on + strand at 390.659 kb on - strand at 390.659 kb on - strand at 390.659 kb on - strand at 390.659 kb on - strand at 390.659 kb on - strand at 390.659 kb on - strand at 390.659 kb on - strand at 390.659 kb on - strand at 391.024 kb on - strand at 391.024 kb on - strand at 391.092 kb on + strand at 391.092 kb on + strand at 391.093 kb on - strand at 391.094 kb on + strand at 391.094 kb on + strand at 391.094 kb on + strand at 391.094 kb on + strand at 391.095 kb on - strand at 391.095 kb on - strand at 391.095 kb on - strand at 391.095 kb on - strand at 391.095 kb on - strand at 391.095 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium acetate 5 mM remove 389,016 - Ga0059261_0406 0.26 -0.3 389,016 - Ga0059261_0406 0.26 -0.2 389,127 + Ga0059261_0406 0.57 -0.9 389,127 + Ga0059261_0406 0.57 -0.1 389,127 + Ga0059261_0406 0.57 -0.9 389,127 + Ga0059261_0406 0.57 +0.7 389,127 + Ga0059261_0406 0.57 -0.2 389,127 + Ga0059261_0406 0.57 -0.0 389,127 + Ga0059261_0406 0.57 -0.2 389,127 + Ga0059261_0406 0.57 -0.3 389,127 + Ga0059261_0406 0.57 -0.9 389,128 - Ga0059261_0406 0.58 +0.8 389,128 - Ga0059261_0406 0.58 +1.1 389,128 - Ga0059261_0406 0.58 -1.4 389,128 - Ga0059261_0406 0.58 +0.2 389,128 - Ga0059261_0406 0.58 +1.4 389,128 - Ga0059261_0406 0.58 +0.3 389,128 - -0.2 389,128 - Ga0059261_0406 0.58 -0.3 389,128 - Ga0059261_0406 0.58 -1.0 389,128 - Ga0059261_0406 0.58 -0.3 389,179 + Ga0059261_0406 0.72 -0.0 389,179 + Ga0059261_0406 0.72 -0.7 389,180 - Ga0059261_0406 0.73 +0.1 389,214 + Ga0059261_0406 0.82 +0.0 389,324 + +0.1 389,378 - +0.3 389,426 + -0.6 389,426 + -0.4 389,449 - -0.2 389,450 + +0.1 389,524 + +0.2 389,524 + +0.2 389,524 + -0.4 389,524 + +0.7 389,524 + -0.1 389,524 + -0.1 389,524 + -0.2 389,525 - +0.7 389,525 - -1.2 389,525 - -1.2 389,525 - +0.4 389,525 - -0.4 389,579 - +0.6 389,579 - -1.0 389,718 - -0.0 389,718 - -0.2 389,718 - +0.3 389,718 - +1.4 389,731 - -0.5 389,777 + -0.6 389,777 + -0.2 389,778 - -0.3 389,828 + -0.4 389,828 + -1.1 389,829 - +0.8 389,840 + -0.7 389,840 + -1.0 389,841 - +0.3 389,920 + Ga0059261_0407 0.12 +0.5 389,920 + Ga0059261_0407 0.12 -0.8 389,920 + Ga0059261_0407 0.12 -0.5 389,921 - Ga0059261_0407 0.12 +0.4 390,017 - Ga0059261_0407 0.29 -0.0 390,017 - Ga0059261_0407 0.29 -1.3 390,045 + Ga0059261_0407 0.33 -0.2 390,045 + Ga0059261_0407 0.33 +0.5 390,045 + Ga0059261_0407 0.33 -0.6 390,046 - Ga0059261_0407 0.34 -0.3 390,046 - Ga0059261_0407 0.34 -0.0 390,046 - Ga0059261_0407 0.34 -1.4 390,046 - Ga0059261_0407 0.34 -0.2 390,046 - Ga0059261_0407 0.34 -0.7 390,086 - Ga0059261_0407 0.40 +0.3 390,170 + Ga0059261_0407 0.55 -0.2 390,171 - Ga0059261_0407 0.55 -1.3 390,171 - Ga0059261_0407 0.55 +0.9 390,171 - Ga0059261_0407 0.55 -0.6 390,178 + Ga0059261_0407 0.56 -0.9 390,205 + -0.9 390,206 - Ga0059261_0407 0.61 -0.6 390,211 + Ga0059261_0407 0.62 -1.2 390,211 + Ga0059261_0407 0.62 +1.0 390,211 + Ga0059261_0407 0.62 +0.0 390,211 + Ga0059261_0407 0.62 -0.6 390,211 + Ga0059261_0407 0.62 +1.1 390,212 - Ga0059261_0407 0.62 -0.1 390,212 - Ga0059261_0407 0.62 -0.4 390,212 - Ga0059261_0407 0.62 -0.3 390,212 - Ga0059261_0407 0.62 +0.4 390,212 - Ga0059261_0407 0.62 -0.3 390,212 - Ga0059261_0407 0.62 +0.3 390,344 + Ga0059261_0407 0.85 +1.0 390,345 - Ga0059261_0407 0.85 +0.4 390,417 + +0.7 390,471 + +0.6 390,481 + -0.7 390,481 + -0.2 390,482 - +1.4 390,541 + +1.3 390,541 + +0.0 390,541 + -0.7 390,541 + -0.5 390,541 + -0.5 390,541 + +0.8 390,542 - +0.4 390,542 - +0.8 390,542 - +0.1 390,542 - +0.3 390,542 - +0.0 390,613 + +0.4 390,613 + +0.2 390,626 + +1.1 390,626 + +0.2 390,626 + +0.1 390,626 + +0.2 390,627 - +0.4 390,627 - +0.2 390,627 - -0.0 390,627 - +0.1 390,627 - -0.4 390,627 - +0.8 390,658 + +0.7 390,658 + +0.3 390,658 + +0.3 390,658 + -0.1 390,658 + -0.6 390,658 + -0.6 390,659 - +0.1 390,659 - -0.1 390,659 - +0.4 390,659 - -1.6 390,659 - +0.3 390,659 - +0.5 390,659 - -0.3 390,659 - +0.7 391,024 - -0.1 391,024 - +0.8 391,092 + +1.0 391,092 + +0.6 391,093 - +0.3 391,094 + -0.3 391,094 + -0.4 391,094 + -0.4 391,094 + +0.3 391,095 - +0.5 391,095 - -0.5 391,095 - +0.6 391,095 - +0.5 391,095 - -1.7 391,095 - +0.0
Or see this region's nucleotide sequence