Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_27525
Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,273,347 | + | AO356_27520 | 0.65 | -0.4 | |
6,273,348 | - | AO356_27520 | 0.65 | -0.0 | |
6,273,629 | - | AO356_27520 | 0.85 | +0.6 | |
6,273,808 | + | -0.8 | |||
6,274,097 | + | AO356_27525 | 0.25 | +0.2 | |
6,274,098 | - | AO356_27525 | 0.25 | +0.4 | |
6,274,098 | - | AO356_27525 | 0.25 | +1.0 | |
6,274,106 | + | AO356_27525 | 0.27 | +1.1 | |
6,274,150 | - | AO356_27525 | 0.34 | +0.3 | |
6,274,221 | - | AO356_27525 | 0.47 | -0.1 | |
6,274,260 | - | AO356_27525 | 0.54 | +0.7 | |
6,274,418 | + | AO356_27525 | 0.82 | +0.0 | |
6,274,475 | + | +0.2 | |||
6,274,476 | - | +1.6 | |||
6,274,534 | - | +0.0 | |||
6,274,608 | - | +0.5 | |||
6,274,679 | + | +0.1 | |||
6,274,719 | - | +0.2 | |||
6,275,098 | - | AO356_27530 | 0.10 | +0.8 | |
6,275,278 | + | AO356_27530 | 0.15 | -0.5 | |
6,275,279 | - | AO356_27530 | 0.15 | +0.8 | |
6,275,279 | - | AO356_27530 | 0.15 | +0.9 | |
6,275,282 | + | AO356_27530 | 0.15 | +1.0 | |
6,275,282 | + | AO356_27530 | 0.15 | +0.2 | |
6,275,282 | + | AO356_27530 | 0.15 | -0.2 | |
6,275,282 | + | AO356_27530 | 0.15 | -0.4 | |
6,275,283 | - | AO356_27530 | 0.15 | -0.7 | |
6,275,283 | - | AO356_27530 | 0.15 | +1.0 | |
6,275,308 | - | AO356_27530 | 0.16 | -1.4 | |
6,275,308 | - | AO356_27530 | 0.16 | +0.5 |
Or see this region's nucleotide sequence