Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26800 and AO356_26805 are separated by 84 nucleotides AO356_26805 and AO356_26810 are separated by 72 nucleotides AO356_26810 and AO356_26815 are separated by 69 nucleotides
AO356_26800: AO356_26800 - aldehyde dehydrogenase, at 6,102,773 to 6,104,260
_26800
AO356_26805: AO356_26805 - hypothetical protein, at 6,104,345 to 6,104,845
_26805
AO356_26810: AO356_26810 - ADP/ATP translocating protein, at 6,104,918 to 6,106,240
_26810
AO356_26815: AO356_26815 - short-chain dehydrogenase, at 6,106,310 to 6,107,368
_26815
Position (kb)
6104
6105
6106
6107 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6103.977 kb on - strand, within AO356_26800 at 6104.021 kb on + strand, within AO356_26800 at 6104.255 kb on - strand at 6104.258 kb on + strand at 6104.258 kb on + strand at 6104.479 kb on + strand, within AO356_26805 at 6104.479 kb on + strand, within AO356_26805 at 6104.494 kb on + strand, within AO356_26805 at 6104.494 kb on + strand, within AO356_26805 at 6104.495 kb on - strand, within AO356_26805 at 6104.694 kb on + strand, within AO356_26805 at 6104.826 kb on - strand at 6104.886 kb on + strand at 6104.886 kb on + strand at 6104.892 kb on - strand at 6104.892 kb on - strand at 6105.145 kb on - strand, within AO356_26810 at 6105.148 kb on + strand, within AO356_26810 at 6105.398 kb on - strand, within AO356_26810 at 6105.469 kb on - strand, within AO356_26810 at 6105.521 kb on + strand, within AO356_26810 at 6105.525 kb on + strand, within AO356_26810 at 6105.526 kb on - strand, within AO356_26810 at 6105.526 kb on - strand, within AO356_26810 at 6105.526 kb on - strand, within AO356_26810 at 6105.818 kb on + strand, within AO356_26810 at 6105.819 kb on - strand, within AO356_26810 at 6105.819 kb on - strand, within AO356_26810 at 6105.819 kb on - strand, within AO356_26810 at 6105.865 kb on - strand, within AO356_26810 at 6105.882 kb on + strand, within AO356_26810 at 6105.904 kb on + strand, within AO356_26810 at 6105.904 kb on + strand, within AO356_26810 at 6105.904 kb on + strand, within AO356_26810 at 6105.966 kb on + strand, within AO356_26810 at 6105.966 kb on + strand, within AO356_26810 at 6105.995 kb on + strand, within AO356_26810 at 6106.224 kb on + strand at 6106.224 kb on + strand at 6106.224 kb on + strand at 6106.225 kb on - strand at 6106.235 kb on - strand at 6106.235 kb on - strand at 6106.263 kb on + strand at 6106.263 kb on + strand at 6106.264 kb on - strand at 6106.318 kb on - strand at 6106.446 kb on + strand, within AO356_26815 at 6106.446 kb on + strand, within AO356_26815 at 6106.447 kb on - strand, within AO356_26815 at 6106.483 kb on - strand, within AO356_26815 at 6106.857 kb on + strand, within AO356_26815 at 6107.201 kb on + strand, within AO356_26815
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 6,103,977 - AO356_26800 0.81 +0.3 6,104,021 + AO356_26800 0.84 -0.5 6,104,255 - -0.1 6,104,258 + +0.5 6,104,258 + +0.5 6,104,479 + AO356_26805 0.27 +0.7 6,104,479 + AO356_26805 0.27 -1.2 6,104,494 + AO356_26805 0.30 +0.9 6,104,494 + AO356_26805 0.30 +0.3 6,104,495 - AO356_26805 0.30 +1.2 6,104,694 + AO356_26805 0.70 +0.1 6,104,826 - +0.1 6,104,886 + +0.8 6,104,886 + +0.2 6,104,892 - -0.0 6,104,892 - -0.2 6,105,145 - AO356_26810 0.17 +1.1 6,105,148 + AO356_26810 0.17 +0.6 6,105,398 - AO356_26810 0.36 -0.0 6,105,469 - AO356_26810 0.42 +0.1 6,105,521 + AO356_26810 0.46 +0.1 6,105,525 + AO356_26810 0.46 +0.6 6,105,526 - AO356_26810 0.46 +0.6 6,105,526 - AO356_26810 0.46 +0.3 6,105,526 - AO356_26810 0.46 +1.3 6,105,818 + AO356_26810 0.68 +0.0 6,105,819 - AO356_26810 0.68 +0.2 6,105,819 - AO356_26810 0.68 +0.0 6,105,819 - AO356_26810 0.68 -0.8 6,105,865 - AO356_26810 0.72 -0.2 6,105,882 + AO356_26810 0.73 +0.6 6,105,904 + AO356_26810 0.75 +1.1 6,105,904 + AO356_26810 0.75 -0.4 6,105,904 + AO356_26810 0.75 +0.2 6,105,966 + AO356_26810 0.79 +1.9 6,105,966 + AO356_26810 0.79 +1.4 6,105,995 + AO356_26810 0.81 -0.2 6,106,224 + -0.3 6,106,224 + -0.5 6,106,224 + -1.9 6,106,225 - +0.6 6,106,235 - +1.0 6,106,235 - +0.5 6,106,263 + -1.2 6,106,263 + +0.5 6,106,264 - +0.7 6,106,318 - -0.6 6,106,446 + AO356_26815 0.13 -0.7 6,106,446 + AO356_26815 0.13 +0.3 6,106,447 - AO356_26815 0.13 +0.8 6,106,483 - AO356_26815 0.16 +1.1 6,106,857 + AO356_26815 0.52 -0.8 6,107,201 + AO356_26815 0.84 -0.5
Or see this region's nucleotide sequence