Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24250 and AO356_24255 are separated by 2 nucleotides AO356_24255 and AO356_24260 overlap by 4 nucleotides
AO356_24250: AO356_24250 - ABC transporter ATP-binding protein, at 5,441,237 to 5,442,883
_24250
AO356_24255: AO356_24255 - non-ribosomal peptide synthetase, at 5,442,886 to 5,446,737
_24255
AO356_24260: AO356_24260 - non-ribosomal peptide synthetase, at 5,446,734 to 5,456,939
_24260
Position (kb)
5442
5443
5444
5445
5446
5447 Strain fitness (log2 ratio)
-2
-1
0
1 at 5441.887 kb on - strand, within AO356_24250 at 5441.890 kb on + strand, within AO356_24250 at 5441.891 kb on - strand, within AO356_24250 at 5442.080 kb on - strand, within AO356_24250 at 5442.082 kb on - strand, within AO356_24250 at 5442.153 kb on + strand, within AO356_24250 at 5442.153 kb on + strand, within AO356_24250 at 5442.153 kb on + strand, within AO356_24250 at 5442.153 kb on + strand, within AO356_24250 at 5442.154 kb on - strand, within AO356_24250 at 5442.154 kb on - strand, within AO356_24250 at 5442.189 kb on + strand, within AO356_24250 at 5442.190 kb on - strand, within AO356_24250 at 5442.463 kb on - strand, within AO356_24250 at 5442.746 kb on + strand at 5442.747 kb on - strand at 5442.961 kb on - strand at 5442.961 kb on - strand at 5443.125 kb on + strand at 5443.125 kb on + strand at 5443.125 kb on + strand at 5443.126 kb on - strand at 5443.126 kb on - strand at 5443.523 kb on + strand, within AO356_24255 at 5443.523 kb on + strand, within AO356_24255 at 5443.524 kb on - strand, within AO356_24255 at 5444.081 kb on + strand, within AO356_24255 at 5444.082 kb on - strand, within AO356_24255 at 5444.082 kb on - strand, within AO356_24255 at 5444.330 kb on + strand, within AO356_24255 at 5444.448 kb on + strand, within AO356_24255 at 5444.450 kb on + strand, within AO356_24255 at 5444.450 kb on + strand, within AO356_24255 at 5444.450 kb on + strand, within AO356_24255 at 5444.451 kb on - strand, within AO356_24255 at 5444.505 kb on - strand, within AO356_24255 at 5444.758 kb on + strand, within AO356_24255 at 5444.970 kb on - strand, within AO356_24255 at 5444.970 kb on - strand, within AO356_24255 at 5445.042 kb on - strand, within AO356_24255 at 5445.042 kb on - strand, within AO356_24255 at 5445.042 kb on - strand, within AO356_24255 at 5445.353 kb on + strand, within AO356_24255 at 5445.392 kb on + strand, within AO356_24255 at 5445.392 kb on + strand, within AO356_24255 at 5445.393 kb on - strand, within AO356_24255 at 5445.787 kb on - strand, within AO356_24255 at 5445.827 kb on + strand, within AO356_24255 at 5445.828 kb on - strand, within AO356_24255 at 5445.869 kb on + strand, within AO356_24255 at 5446.027 kb on + strand, within AO356_24255 at 5446.329 kb on - strand, within AO356_24255 at 5446.337 kb on + strand, within AO356_24255 at 5446.338 kb on - strand, within AO356_24255 at 5446.338 kb on - strand, within AO356_24255 at 5446.874 kb on + strand at 5446.874 kb on + strand at 5446.874 kb on + strand at 5446.874 kb on + strand at 5446.875 kb on - strand at 5446.875 kb on - strand at 5446.911 kb on - strand at 5446.911 kb on - strand at 5446.933 kb on + strand at 5446.933 kb on + strand at 5446.934 kb on - strand at 5446.934 kb on - strand at 5446.947 kb on + strand at 5446.987 kb on + strand at 5446.990 kb on + strand at 5446.990 kb on + strand at 5446.990 kb on + strand at 5446.991 kb on - strand at 5447.282 kb on - strand at 5447.396 kb on - strand at 5447.485 kb on + strand at 5447.485 kb on + strand at 5447.485 kb on + strand at 5447.486 kb on - strand at 5447.486 kb on - strand at 5447.486 kb on - strand at 5447.486 kb on - strand at 5447.489 kb on + strand at 5447.490 kb on - strand at 5447.524 kb on + strand at 5447.525 kb on - strand at 5447.533 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 5,441,887 - AO356_24250 0.39 +0.2 5,441,890 + AO356_24250 0.40 -0.2 5,441,891 - AO356_24250 0.40 -0.6 5,442,080 - AO356_24250 0.51 -0.3 5,442,082 - AO356_24250 0.51 -0.6 5,442,153 + AO356_24250 0.56 -0.3 5,442,153 + AO356_24250 0.56 -0.3 5,442,153 + AO356_24250 0.56 -0.0 5,442,153 + AO356_24250 0.56 -0.7 5,442,154 - AO356_24250 0.56 +1.1 5,442,154 - AO356_24250 0.56 -1.0 5,442,189 + AO356_24250 0.58 -0.3 5,442,190 - AO356_24250 0.58 -0.6 5,442,463 - AO356_24250 0.74 -0.7 5,442,746 + -1.2 5,442,747 - -0.9 5,442,961 - -0.4 5,442,961 - +1.0 5,443,125 + +0.6 5,443,125 + -0.2 5,443,125 + +0.3 5,443,126 - +0.3 5,443,126 - +0.4 5,443,523 + AO356_24255 0.17 +0.9 5,443,523 + AO356_24255 0.17 +0.5 5,443,524 - AO356_24255 0.17 +0.0 5,444,081 + AO356_24255 0.31 +0.1 5,444,082 - AO356_24255 0.31 +0.4 5,444,082 - AO356_24255 0.31 +0.2 5,444,330 + AO356_24255 0.37 -0.2 5,444,448 + AO356_24255 0.41 +0.7 5,444,450 + AO356_24255 0.41 -0.2 5,444,450 + AO356_24255 0.41 +0.8 5,444,450 + AO356_24255 0.41 +0.4 5,444,451 - AO356_24255 0.41 +0.1 5,444,505 - AO356_24255 0.42 -0.0 5,444,758 + AO356_24255 0.49 +1.1 5,444,970 - AO356_24255 0.54 +0.3 5,444,970 - AO356_24255 0.54 +0.4 5,445,042 - AO356_24255 0.56 -0.1 5,445,042 - AO356_24255 0.56 +0.2 5,445,042 - AO356_24255 0.56 -0.7 5,445,353 + AO356_24255 0.64 +0.2 5,445,392 + AO356_24255 0.65 -0.4 5,445,392 + AO356_24255 0.65 -0.7 5,445,393 - AO356_24255 0.65 +0.3 5,445,787 - AO356_24255 0.75 +0.6 5,445,827 + AO356_24255 0.76 -0.4 5,445,828 - AO356_24255 0.76 +0.1 5,445,869 + AO356_24255 0.77 -0.1 5,446,027 + AO356_24255 0.82 -0.7 5,446,329 - AO356_24255 0.89 +0.1 5,446,337 + AO356_24255 0.90 +0.4 5,446,338 - AO356_24255 0.90 +0.8 5,446,338 - AO356_24255 0.90 +1.1 5,446,874 + +0.4 5,446,874 + -0.4 5,446,874 + -1.1 5,446,874 + +0.8 5,446,875 - -0.2 5,446,875 - -0.2 5,446,911 - +0.1 5,446,911 - -0.0 5,446,933 + +1.3 5,446,933 + -0.8 5,446,934 - +0.8 5,446,934 - +1.0 5,446,947 + -0.4 5,446,987 + +0.3 5,446,990 + +1.2 5,446,990 + -0.2 5,446,990 + +0.1 5,446,991 - +0.6 5,447,282 - -0.6 5,447,396 - -0.1 5,447,485 + +0.9 5,447,485 + +1.0 5,447,485 + -2.2 5,447,486 - -0.5 5,447,486 - +0.0 5,447,486 - +0.8 5,447,486 - -0.4 5,447,489 + -0.9 5,447,490 - +1.0 5,447,524 + -0.0 5,447,525 - -0.7 5,447,533 + +1.4
Or see this region's nucleotide sequence