Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24120 and AO356_24125 are separated by 191 nucleotides AO356_24125 and AO356_24130 are separated by 136 nucleotides
AO356_24120: AO356_24120 - peptidase S8 and S53 subtilisin kexin sedolisin, at 5,409,228 to 5,410,994
_24120
AO356_24125: AO356_24125 - hypothetical protein, at 5,411,186 to 5,411,479
_24125
AO356_24130: AO356_24130 - NADPH-dependent FMN reductase, at 5,411,616 to 5,412,350
_24130
Position (kb)
5411
5412 Strain fitness (log2 ratio)
-1
0
1
2 at 5410.280 kb on - strand, within AO356_24120 at 5410.280 kb on - strand, within AO356_24120 at 5410.487 kb on - strand, within AO356_24120 at 5410.487 kb on - strand, within AO356_24120 at 5410.508 kb on + strand, within AO356_24120 at 5410.603 kb on + strand, within AO356_24120 at 5410.604 kb on - strand, within AO356_24120 at 5410.604 kb on - strand, within AO356_24120 at 5410.604 kb on - strand, within AO356_24120 at 5410.604 kb on - strand, within AO356_24120 at 5410.604 kb on - strand, within AO356_24120 at 5410.987 kb on - strand at 5410.987 kb on - strand at 5411.037 kb on - strand at 5411.079 kb on + strand at 5411.079 kb on + strand at 5411.080 kb on - strand at 5411.080 kb on - strand at 5411.080 kb on - strand at 5411.162 kb on + strand at 5411.163 kb on - strand at 5411.163 kb on - strand at 5411.163 kb on - strand at 5411.188 kb on - strand at 5411.250 kb on + strand, within AO356_24125 at 5411.250 kb on + strand, within AO356_24125 at 5411.251 kb on - strand, within AO356_24125 at 5411.251 kb on - strand, within AO356_24125 at 5411.258 kb on + strand, within AO356_24125 at 5411.259 kb on - strand, within AO356_24125 at 5411.350 kb on - strand, within AO356_24125 at 5411.426 kb on - strand, within AO356_24125 at 5411.494 kb on + strand at 5411.495 kb on - strand at 5411.495 kb on - strand at 5411.525 kb on + strand at 5411.525 kb on + strand at 5411.525 kb on + strand at 5411.526 kb on - strand at 5411.528 kb on + strand at 5411.566 kb on - strand at 5411.617 kb on + strand at 5411.692 kb on + strand, within AO356_24130 at 5411.692 kb on + strand, within AO356_24130 at 5411.693 kb on - strand, within AO356_24130 at 5411.693 kb on - strand, within AO356_24130 at 5411.693 kb on - strand, within AO356_24130 at 5411.764 kb on + strand, within AO356_24130 at 5411.765 kb on - strand, within AO356_24130 at 5411.765 kb on - strand, within AO356_24130 at 5411.765 kb on - strand, within AO356_24130 at 5412.075 kb on + strand, within AO356_24130 at 5412.075 kb on + strand, within AO356_24130 at 5412.221 kb on - strand, within AO356_24130 at 5412.221 kb on - strand, within AO356_24130 at 5412.225 kb on + strand, within AO356_24130 at 5412.225 kb on + strand, within AO356_24130 at 5412.225 kb on + strand, within AO356_24130 at 5412.226 kb on - strand, within AO356_24130 at 5412.226 kb on - strand, within AO356_24130 at 5412.232 kb on - strand, within AO356_24130 at 5412.232 kb on - strand, within AO356_24130 at 5412.285 kb on + strand at 5412.285 kb on + strand at 5412.286 kb on - strand at 5412.286 kb on - strand at 5412.379 kb on - strand at 5412.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 5,410,280 - AO356_24120 0.60 -1.2 5,410,280 - AO356_24120 0.60 +2.0 5,410,487 - AO356_24120 0.71 -0.6 5,410,487 - AO356_24120 0.71 +0.0 5,410,508 + AO356_24120 0.72 -0.9 5,410,603 + AO356_24120 0.78 +0.4 5,410,604 - AO356_24120 0.78 -1.6 5,410,604 - AO356_24120 0.78 +0.5 5,410,604 - AO356_24120 0.78 -0.0 5,410,604 - AO356_24120 0.78 -1.4 5,410,604 - AO356_24120 0.78 +0.7 5,410,987 - -0.2 5,410,987 - +0.6 5,411,037 - -0.1 5,411,079 + +0.6 5,411,079 + +0.3 5,411,080 - -0.5 5,411,080 - -0.6 5,411,080 - -1.6 5,411,162 + +1.0 5,411,163 - +0.3 5,411,163 - +1.1 5,411,163 - -0.0 5,411,188 - +0.3 5,411,250 + AO356_24125 0.22 +0.2 5,411,250 + AO356_24125 0.22 +2.3 5,411,251 - AO356_24125 0.22 -1.1 5,411,251 - AO356_24125 0.22 +0.8 5,411,258 + AO356_24125 0.24 -1.2 5,411,259 - AO356_24125 0.25 +1.9 5,411,350 - AO356_24125 0.56 +1.3 5,411,426 - AO356_24125 0.82 +0.8 5,411,494 + -0.8 5,411,495 - +0.2 5,411,495 - +0.2 5,411,525 + +0.7 5,411,525 + +1.3 5,411,525 + -1.0 5,411,526 - -0.5 5,411,528 + -0.2 5,411,566 - -0.5 5,411,617 + -0.0 5,411,692 + AO356_24130 0.10 -0.2 5,411,692 + AO356_24130 0.10 -0.2 5,411,693 - AO356_24130 0.10 -0.7 5,411,693 - AO356_24130 0.10 +0.6 5,411,693 - AO356_24130 0.10 +0.8 5,411,764 + AO356_24130 0.20 -0.4 5,411,765 - AO356_24130 0.20 +0.9 5,411,765 - AO356_24130 0.20 -0.8 5,411,765 - AO356_24130 0.20 -0.2 5,412,075 + AO356_24130 0.62 +0.4 5,412,075 + AO356_24130 0.62 -0.2 5,412,221 - AO356_24130 0.82 -0.0 5,412,221 - AO356_24130 0.82 +0.6 5,412,225 + AO356_24130 0.83 +0.2 5,412,225 + AO356_24130 0.83 -0.4 5,412,225 + AO356_24130 0.83 -1.4 5,412,226 - AO356_24130 0.83 -0.4 5,412,226 - AO356_24130 0.83 -0.4 5,412,232 - AO356_24130 0.84 +0.6 5,412,232 - AO356_24130 0.84 +0.3 5,412,285 + -1.2 5,412,285 + -0.3 5,412,286 - -1.0 5,412,286 - +0.9 5,412,379 - +0.3 5,412,379 - +1.4
Or see this region's nucleotide sequence