Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15470 and AO356_15475 are separated by 130 nucleotides AO356_15475 and AO356_15480 are separated by 28 nucleotides AO356_15480 and AO356_15485 are separated by 98 nucleotides
AO356_15470: AO356_15470 - hypothetical protein, at 3,503,151 to 3,504,152
_15470
AO356_15475: AO356_15475 - ferrous iron transporter, at 3,504,283 to 3,505,176
_15475
AO356_15480: AO356_15480 - polyribonucleotide nucleotidyltransferase, at 3,505,205 to 3,505,624
_15480
AO356_15485: AO356_15485 - ATP-dependent helicase, at 3,505,723 to 3,508,242
_15485
Position (kb)
3504
3505
3506 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3503.295 kb on + strand, within AO356_15470 at 3503.296 kb on - strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.392 kb on - strand, within AO356_15470 at 3503.392 kb on - strand, within AO356_15470 at 3503.414 kb on + strand, within AO356_15470 at 3503.509 kb on - strand, within AO356_15470 at 3503.644 kb on - strand, within AO356_15470 at 3503.656 kb on - strand, within AO356_15470 at 3503.656 kb on - strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.686 kb on - strand, within AO356_15470 at 3503.686 kb on - strand, within AO356_15470 at 3503.686 kb on - strand, within AO356_15470 at 3503.686 kb on - strand, within AO356_15470 at 3503.712 kb on + strand, within AO356_15470 at 3503.712 kb on + strand, within AO356_15470 at 3503.712 kb on + strand, within AO356_15470 at 3503.713 kb on - strand, within AO356_15470 at 3503.713 kb on - strand, within AO356_15470 at 3503.719 kb on - strand, within AO356_15470 at 3503.757 kb on + strand, within AO356_15470 at 3503.757 kb on + strand, within AO356_15470 at 3503.796 kb on + strand, within AO356_15470 at 3503.809 kb on - strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.862 kb on + strand, within AO356_15470 at 3503.862 kb on + strand, within AO356_15470 at 3503.862 kb on + strand, within AO356_15470 at 3503.863 kb on - strand, within AO356_15470 at 3503.863 kb on - strand, within AO356_15470 at 3503.863 kb on - strand, within AO356_15470 at 3503.863 kb on - strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.872 kb on - strand, within AO356_15470 at 3503.892 kb on + strand, within AO356_15470 at 3503.892 kb on + strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.066 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.148 kb on - strand at 3504.148 kb on - strand at 3504.148 kb on - strand at 3504.148 kb on - strand at 3504.148 kb on - strand at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.664 kb on + strand, within AO356_15475 at 3504.904 kb on - strand, within AO356_15475 at 3504.980 kb on - strand, within AO356_15475 at 3504.980 kb on - strand, within AO356_15475 at 3504.980 kb on - strand, within AO356_15475 at 3504.980 kb on - strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.987 kb on - strand, within AO356_15475 at 3504.987 kb on - strand, within AO356_15475 at 3504.987 kb on - strand, within AO356_15475 at 3505.410 kb on + strand, within AO356_15480 at 3505.410 kb on + strand, within AO356_15480 at 3505.410 kb on + strand, within AO356_15480 at 3505.410 kb on + strand, within AO356_15480 at 3505.411 kb on - strand, within AO356_15480 at 3505.411 kb on - strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.542 kb on + strand, within AO356_15480 at 3505.543 kb on - strand, within AO356_15480 at 3505.618 kb on + strand at 3505.618 kb on + strand at 3505.618 kb on + strand at 3505.619 kb on - strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.644 kb on - strand at 3505.644 kb on - strand at 3505.644 kb on - strand at 3505.644 kb on - strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.647 kb on - strand at 3505.647 kb on - strand at 3505.647 kb on - strand at 3505.696 kb on + strand at 3505.696 kb on + strand at 3505.697 kb on - strand at 3505.697 kb on - strand at 3505.819 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 3,503,295 + AO356_15470 0.14 +0.5 3,503,296 - AO356_15470 0.14 +0.5 3,503,391 + AO356_15470 0.24 -0.7 3,503,391 + AO356_15470 0.24 -1.8 3,503,391 + AO356_15470 0.24 +0.2 3,503,391 + AO356_15470 0.24 +0.7 3,503,391 + AO356_15470 0.24 +0.5 3,503,392 - AO356_15470 0.24 +0.3 3,503,392 - AO356_15470 0.24 +0.1 3,503,414 + AO356_15470 0.26 +0.9 3,503,509 - AO356_15470 0.36 +0.1 3,503,644 - AO356_15470 0.49 -0.1 3,503,656 - AO356_15470 0.50 -0.0 3,503,656 - AO356_15470 0.50 -0.8 3,503,685 + AO356_15470 0.53 +0.3 3,503,685 + AO356_15470 0.53 +0.5 3,503,685 + AO356_15470 0.53 -0.7 3,503,685 + AO356_15470 0.53 -1.1 3,503,685 + AO356_15470 0.53 -0.1 3,503,686 - AO356_15470 0.53 -0.1 3,503,686 - AO356_15470 0.53 +0.3 3,503,686 - AO356_15470 0.53 -1.3 3,503,686 - AO356_15470 0.53 +0.3 3,503,712 + AO356_15470 0.56 +0.6 3,503,712 + AO356_15470 0.56 -0.3 3,503,712 + AO356_15470 0.56 +0.1 3,503,713 - AO356_15470 0.56 +0.7 3,503,713 - AO356_15470 0.56 -1.4 3,503,719 - AO356_15470 0.57 +0.3 3,503,757 + AO356_15470 0.60 -0.2 3,503,757 + AO356_15470 0.60 +0.4 3,503,796 + AO356_15470 0.64 -1.5 3,503,809 - AO356_15470 0.66 +0.1 3,503,821 + AO356_15470 0.67 +0.2 3,503,821 + AO356_15470 0.67 -0.0 3,503,821 + AO356_15470 0.67 -0.0 3,503,821 + AO356_15470 0.67 -1.0 3,503,821 + AO356_15470 0.67 +0.5 3,503,822 - AO356_15470 0.67 -0.2 3,503,822 - AO356_15470 0.67 -0.4 3,503,822 - AO356_15470 0.67 +1.3 3,503,822 - AO356_15470 0.67 +0.5 3,503,822 - AO356_15470 0.67 -1.0 3,503,862 + AO356_15470 0.71 -0.2 3,503,862 + AO356_15470 0.71 +0.7 3,503,862 + AO356_15470 0.71 +0.6 3,503,863 - AO356_15470 0.71 -0.7 3,503,863 - AO356_15470 0.71 -0.3 3,503,863 - AO356_15470 0.71 +0.4 3,503,863 - AO356_15470 0.71 -0.1 3,503,865 + AO356_15470 0.71 -0.5 3,503,865 + AO356_15470 0.71 -1.2 3,503,865 + AO356_15470 0.71 +1.4 3,503,865 + AO356_15470 0.71 -1.6 3,503,865 + AO356_15470 0.71 +2.5 3,503,865 + AO356_15470 0.71 -0.0 3,503,865 + AO356_15470 0.71 -0.7 3,503,865 + AO356_15470 0.71 -1.1 3,503,865 + AO356_15470 0.71 +0.5 3,503,865 + AO356_15470 0.71 -0.7 3,503,865 + AO356_15470 0.71 -1.4 3,503,865 + AO356_15470 0.71 -0.2 3,503,866 - AO356_15470 0.71 -0.5 3,503,866 - AO356_15470 0.71 +0.6 3,503,866 - AO356_15470 0.71 +0.7 3,503,866 - AO356_15470 0.71 -0.2 3,503,866 - AO356_15470 0.71 +0.5 3,503,866 - AO356_15470 0.71 +0.8 3,503,871 + AO356_15470 0.72 +0.5 3,503,871 + AO356_15470 0.72 +0.6 3,503,871 + AO356_15470 0.72 -1.0 3,503,871 + AO356_15470 0.72 -0.9 3,503,871 + AO356_15470 0.72 -0.5 3,503,871 + AO356_15470 0.72 -0.4 3,503,872 - AO356_15470 0.72 -0.2 3,503,892 + AO356_15470 0.74 +0.6 3,503,892 + AO356_15470 0.74 -0.6 3,503,893 - AO356_15470 0.74 -0.2 3,503,893 - AO356_15470 0.74 -0.0 3,503,893 - AO356_15470 0.74 -0.1 3,503,893 - AO356_15470 0.74 +0.1 3,503,893 - AO356_15470 0.74 -0.8 3,503,893 - AO356_15470 0.74 +1.2 3,503,893 - AO356_15470 0.74 -1.0 3,504,060 + -1.8 3,504,060 + +0.1 3,504,060 + +0.5 3,504,060 + -0.4 3,504,060 + +0.4 3,504,060 + +0.3 3,504,060 + -0.5 3,504,060 + +0.4 3,504,060 + +0.3 3,504,061 - -0.9 3,504,061 - -0.1 3,504,061 - -0.8 3,504,061 - +0.2 3,504,061 - -0.3 3,504,061 - -1.0 3,504,061 - -0.4 3,504,061 - +0.1 3,504,066 + -0.9 3,504,147 + -0.1 3,504,147 + +0.1 3,504,147 + +1.5 3,504,147 + -2.5 3,504,147 + +0.4 3,504,147 + +0.9 3,504,147 + +0.2 3,504,147 + +0.6 3,504,148 - -1.5 3,504,148 - -0.8 3,504,148 - +0.7 3,504,148 - -0.2 3,504,148 - -0.4 3,504,605 + AO356_15475 0.36 -0.5 3,504,605 + AO356_15475 0.36 -0.0 3,504,605 + AO356_15475 0.36 +0.0 3,504,605 + AO356_15475 0.36 -1.2 3,504,605 + AO356_15475 0.36 -0.2 3,504,605 + AO356_15475 0.36 +0.1 3,504,605 + AO356_15475 0.36 +0.5 3,504,605 + AO356_15475 0.36 -1.0 3,504,606 - AO356_15475 0.36 -0.5 3,504,606 - AO356_15475 0.36 -1.0 3,504,606 - AO356_15475 0.36 +1.0 3,504,606 - AO356_15475 0.36 +0.8 3,504,606 - AO356_15475 0.36 -0.5 3,504,606 - AO356_15475 0.36 -0.7 3,504,664 + AO356_15475 0.43 +0.8 3,504,904 - AO356_15475 0.69 +0.1 3,504,980 - AO356_15475 0.78 -0.2 3,504,980 - AO356_15475 0.78 +0.6 3,504,980 - AO356_15475 0.78 -0.2 3,504,980 - AO356_15475 0.78 -0.5 3,504,986 + AO356_15475 0.79 +0.2 3,504,986 + AO356_15475 0.79 +0.0 3,504,986 + AO356_15475 0.79 +0.3 3,504,986 + AO356_15475 0.79 +0.3 3,504,986 + AO356_15475 0.79 -1.0 3,504,987 - AO356_15475 0.79 -3.5 3,504,987 - AO356_15475 0.79 -0.4 3,504,987 - AO356_15475 0.79 -1.8 3,505,410 + AO356_15480 0.49 +0.5 3,505,410 + AO356_15480 0.49 -0.7 3,505,410 + AO356_15480 0.49 +0.7 3,505,410 + AO356_15480 0.49 -0.0 3,505,411 - AO356_15480 0.49 -0.1 3,505,411 - AO356_15480 0.49 +0.4 3,505,464 + AO356_15480 0.62 +0.0 3,505,464 + AO356_15480 0.62 +1.1 3,505,464 + AO356_15480 0.62 -0.0 3,505,464 + AO356_15480 0.62 +1.3 3,505,464 + AO356_15480 0.62 +0.3 3,505,464 + AO356_15480 0.62 -0.6 3,505,464 + AO356_15480 0.62 +0.4 3,505,464 + AO356_15480 0.62 +1.5 3,505,464 + AO356_15480 0.62 -1.1 3,505,465 - AO356_15480 0.62 -0.3 3,505,465 - AO356_15480 0.62 +1.1 3,505,465 - AO356_15480 0.62 +0.7 3,505,465 - AO356_15480 0.62 +0.5 3,505,465 - AO356_15480 0.62 -0.0 3,505,465 - AO356_15480 0.62 +0.0 3,505,465 - AO356_15480 0.62 -0.5 3,505,465 - AO356_15480 0.62 -1.1 3,505,465 - AO356_15480 0.62 -0.3 3,505,542 + AO356_15480 0.80 -0.4 3,505,543 - AO356_15480 0.80 +0.5 3,505,618 + +0.0 3,505,618 + +0.8 3,505,618 + -0.0 3,505,619 - -0.4 3,505,624 + +0.2 3,505,624 + -0.2 3,505,624 + -0.0 3,505,624 + +0.3 3,505,624 + +0.3 3,505,624 + -0.7 3,505,624 + -0.5 3,505,624 + -1.5 3,505,625 - +0.2 3,505,625 - -0.5 3,505,625 - -0.5 3,505,625 - +0.3 3,505,625 - +0.3 3,505,625 - +0.4 3,505,625 - -1.3 3,505,643 + -0.2 3,505,643 + -0.4 3,505,643 + +1.0 3,505,643 + +0.5 3,505,643 + -0.6 3,505,643 + -0.5 3,505,643 + +0.2 3,505,644 - -0.5 3,505,644 - -0.9 3,505,644 - +0.4 3,505,644 - -0.2 3,505,646 + +0.0 3,505,646 + +0.1 3,505,646 + -0.6 3,505,646 + +1.0 3,505,646 + -0.7 3,505,646 + +0.5 3,505,647 - -0.0 3,505,647 - -0.3 3,505,647 - +0.3 3,505,696 + -1.5 3,505,696 + -1.9 3,505,697 - -0.6 3,505,697 - -0.3 3,505,819 - +0.7
Or see this region's nucleotide sequence