Experiment: Paraquat dichloride 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_12540 and AO356_12545 are separated by 144 nucleotides AO356_12545 and AO356_12550 are separated by 141 nucleotides
AO356_12540: AO356_12540 - phosphopantothenoylcysteine decarboxylase, at 2,860,741 to 2,861,949
_12540
AO356_12545: AO356_12545 - hypothetical protein, at 2,862,094 to 2,862,768
_12545
AO356_12550: AO356_12550 - peptide ABC transporter substrate-binding protein, at 2,862,910 to 2,864,496
_12550
Position (kb)
2862
2863 Strain fitness (log2 ratio)
-2
-1
0
1 at 2861.950 kb on - strand at 2862.040 kb on - strand at 2862.099 kb on + strand at 2862.099 kb on + strand at 2862.099 kb on + strand at 2862.099 kb on + strand at 2862.100 kb on - strand at 2862.100 kb on - strand at 2862.140 kb on + strand at 2862.195 kb on - strand, within AO356_12545 at 2862.300 kb on + strand, within AO356_12545 at 2862.427 kb on + strand, within AO356_12545 at 2862.427 kb on + strand, within AO356_12545 at 2862.427 kb on + strand, within AO356_12545 at 2862.428 kb on - strand, within AO356_12545 at 2862.428 kb on - strand, within AO356_12545 at 2862.428 kb on - strand, within AO356_12545 at 2862.531 kb on + strand, within AO356_12545 at 2862.532 kb on - strand, within AO356_12545 at 2862.754 kb on + strand at 2862.754 kb on + strand at 2862.766 kb on + strand at 2862.766 kb on + strand at 2862.767 kb on - strand at 2862.767 kb on - strand at 2862.767 kb on - strand at 2862.767 kb on - strand at 2862.767 kb on - strand at 2862.767 kb on - strand at 2862.767 kb on - strand at 2862.786 kb on + strand at 2862.786 kb on + strand at 2862.786 kb on + strand at 2862.786 kb on + strand at 2862.786 kb on + strand at 2862.787 kb on - strand at 2862.787 kb on - strand at 2862.787 kb on - strand at 2862.851 kb on + strand at 2862.851 kb on + strand at 2862.851 kb on + strand at 2862.852 kb on - strand at 2862.852 kb on - strand at 2862.911 kb on + strand at 2862.911 kb on + strand at 2862.911 kb on + strand at 2862.911 kb on + strand at 2862.911 kb on + strand at 2862.912 kb on - strand at 2862.912 kb on - strand at 2862.932 kb on + strand at 2862.932 kb on + strand at 2862.933 kb on - strand at 2862.933 kb on - strand at 2862.962 kb on + strand at 2863.058 kb on + strand at 2863.058 kb on + strand at 2863.059 kb on - strand at 2863.133 kb on + strand, within AO356_12550 at 2863.484 kb on + strand, within AO356_12550 at 2863.484 kb on + strand, within AO356_12550 at 2863.484 kb on + strand, within AO356_12550 at 2863.484 kb on + strand, within AO356_12550 at 2863.485 kb on - strand, within AO356_12550 at 2863.553 kb on + strand, within AO356_12550 at 2863.554 kb on - strand, within AO356_12550 at 2863.554 kb on - strand, within AO356_12550
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.0625 mg/ml remove 2,861,950 - +0.8 2,862,040 - -0.1 2,862,099 + +1.4 2,862,099 + +0.2 2,862,099 + -1.5 2,862,099 + -1.3 2,862,100 - -1.4 2,862,100 - -0.2 2,862,140 + +1.2 2,862,195 - AO356_12545 0.15 +0.6 2,862,300 + AO356_12545 0.31 -1.1 2,862,427 + AO356_12545 0.49 -0.5 2,862,427 + AO356_12545 0.49 -0.3 2,862,427 + AO356_12545 0.49 -0.7 2,862,428 - AO356_12545 0.49 -0.4 2,862,428 - AO356_12545 0.49 -0.5 2,862,428 - AO356_12545 0.49 -0.5 2,862,531 + AO356_12545 0.65 -0.9 2,862,532 - AO356_12545 0.65 -0.6 2,862,754 + -0.2 2,862,754 + +0.3 2,862,766 + -0.2 2,862,766 + +1.0 2,862,767 - -0.8 2,862,767 - -0.7 2,862,767 - +1.5 2,862,767 - +0.5 2,862,767 - +0.5 2,862,767 - -0.3 2,862,767 - -0.4 2,862,786 + -0.6 2,862,786 + +0.4 2,862,786 + -0.0 2,862,786 + -1.7 2,862,786 + -0.1 2,862,787 - +0.2 2,862,787 - +0.0 2,862,787 - -0.0 2,862,851 + -0.9 2,862,851 + -1.8 2,862,851 + -0.5 2,862,852 - -1.0 2,862,852 - +1.0 2,862,911 + -0.1 2,862,911 + +0.0 2,862,911 + +0.1 2,862,911 + -0.2 2,862,911 + +0.4 2,862,912 - +0.6 2,862,912 - +0.9 2,862,932 + -0.5 2,862,932 + -0.5 2,862,933 - -0.9 2,862,933 - -0.3 2,862,962 + +0.2 2,863,058 + -0.3 2,863,058 + -1.4 2,863,059 - +0.0 2,863,133 + AO356_12550 0.14 -1.2 2,863,484 + AO356_12550 0.36 -0.4 2,863,484 + AO356_12550 0.36 -0.2 2,863,484 + AO356_12550 0.36 +0.2 2,863,484 + AO356_12550 0.36 -0.0 2,863,485 - AO356_12550 0.36 -0.3 2,863,553 + AO356_12550 0.41 -1.9 2,863,554 - AO356_12550 0.41 -1.9 2,863,554 - AO356_12550 0.41 +0.4
Or see this region's nucleotide sequence