Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS11730 and RR42_RS11740 are separated by 795 nucleotides RR42_RS11740 and RR42_RS11745 overlap by 26 nucleotides RR42_RS11745 and RR42_RS11750 are separated by 141 nucleotides
RR42_RS11730: RR42_RS11730 - DNA-binding protein, at 2,509,772 to 2,510,239
_RS11730
RR42_RS11740: RR42_RS11740 - GMP synthase, at 2,511,035 to 2,512,654
_RS11740
RR42_RS11745: RR42_RS11745 - membrane protein, at 2,512,629 to 2,513,231
_RS11745
RR42_RS11750: RR42_RS11750 - inosine-5-monophosphate dehydrogenase, at 2,513,373 to 2,514,836
_RS11750
Position (kb)
2511
2512
2513 Strain fitness (log2 ratio)
-1
0
1 at 2510.347 kb on + strand at 2510.348 kb on - strand at 2510.348 kb on - strand at 2510.348 kb on - strand at 2510.378 kb on + strand at 2510.482 kb on - strand at 2510.482 kb on - strand at 2510.482 kb on - strand at 2510.521 kb on + strand at 2510.521 kb on + strand at 2510.521 kb on + strand at 2510.749 kb on + strand at 2510.749 kb on + strand at 2510.750 kb on - strand at 2510.827 kb on - strand at 2510.827 kb on - strand at 2510.830 kb on + strand at 2510.831 kb on - strand at 2510.831 kb on - strand at 2510.956 kb on + strand at 2510.957 kb on - strand at 2510.957 kb on - strand at 2510.957 kb on - strand at 2510.957 kb on - strand at 2512.953 kb on - strand, within RR42_RS11745 at 2512.953 kb on - strand, within RR42_RS11745 at 2512.953 kb on - strand, within RR42_RS11745 at 2512.953 kb on - strand, within RR42_RS11745 at 2513.025 kb on - strand, within RR42_RS11745 at 2513.025 kb on - strand, within RR42_RS11745 at 2513.025 kb on - strand, within RR42_RS11745 at 2513.099 kb on - strand, within RR42_RS11745 at 2513.136 kb on - strand, within RR42_RS11745 at 2513.136 kb on - strand, within RR42_RS11745 at 2513.136 kb on - strand, within RR42_RS11745 at 2513.224 kb on - strand at 2513.224 kb on - strand at 2513.384 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 2,510,347 + +1.3 2,510,348 - -0.1 2,510,348 - +0.9 2,510,348 - -1.0 2,510,378 + +0.3 2,510,482 - -0.1 2,510,482 - -1.2 2,510,482 - -0.0 2,510,521 + -0.4 2,510,521 + -0.7 2,510,521 + +0.2 2,510,749 + +0.2 2,510,749 + +0.2 2,510,750 - -0.8 2,510,827 - +0.2 2,510,827 - -0.9 2,510,830 + -0.6 2,510,831 - -0.8 2,510,831 - +1.0 2,510,956 + -1.1 2,510,957 - +0.7 2,510,957 - -1.5 2,510,957 - -0.7 2,510,957 - +1.1 2,512,953 - RR42_RS11745 0.54 +0.0 2,512,953 - RR42_RS11745 0.54 -0.1 2,512,953 - RR42_RS11745 0.54 -0.8 2,512,953 - RR42_RS11745 0.54 +0.2 2,513,025 - RR42_RS11745 0.66 +0.2 2,513,025 - RR42_RS11745 0.66 +0.7 2,513,025 - RR42_RS11745 0.66 -0.0 2,513,099 - RR42_RS11745 0.78 -0.5 2,513,136 - RR42_RS11745 0.84 -0.3 2,513,136 - RR42_RS11745 0.84 -0.1 2,513,136 - RR42_RS11745 0.84 +0.6 2,513,224 - -0.3 2,513,224 - -0.3 2,513,384 - -0.9
Or see this region's nucleotide sequence