Experiment: Paraquat dichloride 0.016 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_58 and Pf1N1B4_59 are separated by 244 nucleotides Pf1N1B4_59 and Pf1N1B4_60 overlap by 1 nucleotides Pf1N1B4_60 and Pf1N1B4_61 are separated by 276 nucleotides Pf1N1B4_61 and Pf1N1B4_62 are separated by 71 nucleotides
Pf1N1B4_58 - Transaldolase (EC 2.2.1.2), at 62,365 to 63,291
_58
Pf1N1B4_59 - Serine-protein kinase RsbW (EC 2.7.11.1), at 63,536 to 64,018
_59
Pf1N1B4_60 - Serine phosphatase RsbU, regulator of sigma subunit, at 64,018 to 65,199
_60
Pf1N1B4_61 - FIG00953170: hypothetical protein, at 65,476 to 65,775
_61
Pf1N1B4_62 - VacJ-like lipoprotein precursor, at 65,847 to 66,536
_62
Position (kb)
64
65
66 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 63.294 kb on + strand at 63.367 kb on + strand at 63.367 kb on + strand at 63.440 kb on + strand at 63.440 kb on + strand at 63.441 kb on - strand at 63.445 kb on + strand at 63.445 kb on + strand at 65.279 kb on - strand at 65.315 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.325 kb on - strand at 65.344 kb on - strand at 65.344 kb on - strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.434 kb on + strand at 65.434 kb on + strand at 65.434 kb on + strand at 65.497 kb on + strand at 65.498 kb on - strand at 65.754 kb on + strand at 65.755 kb on - strand at 65.755 kb on - strand at 65.755 kb on - strand at 65.755 kb on - strand at 65.755 kb on - strand at 65.773 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.016 mg/mL remove 63,294 + +1.4 63,367 + +0.2 63,367 + -0.6 63,440 + +0.6 63,440 + -0.8 63,441 - -1.1 63,445 + +0.5 63,445 + +0.5 65,279 - -0.2 65,315 - -2.4 65,319 - +2.4 65,319 - +0.4 65,319 - +0.8 65,319 - -0.2 65,319 - +1.0 65,319 - -1.4 65,319 - +0.4 65,319 - -1.0 65,325 - +0.0 65,344 - -1.0 65,344 - +0.2 65,410 + -1.1 65,410 + -0.2 65,410 + +0.8 65,410 + +0.8 65,410 + -1.4 65,410 + -1.0 65,410 + -0.2 65,410 + +0.6 65,410 + +0.0 65,410 + -0.6 65,410 + -0.6 65,410 + +0.0 65,434 + +1.4 65,434 + -0.6 65,434 + +0.4 65,497 + -1.8 65,498 - +1.6 65,754 + +0.6 65,755 - -0.5 65,755 - -1.8 65,755 - +0.8 65,755 - -0.6 65,755 - -0.6 65,773 + -0.2
Or see this region's nucleotide sequence