Experiment: Paraquat dichloride 0.016 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4131 and Pf1N1B4_4132 overlap by 4 nucleotides Pf1N1B4_4132 and Pf1N1B4_4133 are separated by 90 nucleotides
Pf1N1B4_4131 - Mobile element protein, at 4,572,187 to 4,572,507
_4131
Pf1N1B4_4132 - Mobile element protein, at 4,572,504 to 4,572,839
_4132
Pf1N1B4_4133 - Mobile element protein, at 4,572,930 to 4,573,388
_4133
Position (kb)
4572
4573
4574 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4571.986 kb on + strand at 4571.986 kb on + strand at 4571.986 kb on + strand at 4571.987 kb on - strand at 4572.056 kb on + strand at 4572.056 kb on + strand at 4572.057 kb on - strand at 4572.088 kb on + strand at 4572.385 kb on - strand, within Pf1N1B4_4131 at 4572.621 kb on + strand, within Pf1N1B4_4132 at 4572.621 kb on + strand, within Pf1N1B4_4132 at 4572.621 kb on + strand, within Pf1N1B4_4132 at 4572.732 kb on - strand, within Pf1N1B4_4132 at 4572.784 kb on + strand, within Pf1N1B4_4132 at 4572.922 kb on + strand at 4573.074 kb on + strand, within Pf1N1B4_4133 at 4573.074 kb on + strand at 4573.074 kb on + strand, within Pf1N1B4_4133 at 4573.074 kb on + strand, within Pf1N1B4_4133 at 4573.074 kb on + strand at 4573.074 kb on + strand at 4573.074 kb on + strand, within Pf1N1B4_4133 at 4573.074 kb on + strand, within Pf1N1B4_4133 at 4573.074 kb on + strand, within Pf1N1B4_4133 at 4573.075 kb on - strand at 4573.075 kb on - strand, within Pf1N1B4_4133 at 4573.288 kb on - strand at 4573.294 kb on - strand, within Pf1N1B4_4133 at 4573.375 kb on + strand at 4573.376 kb on - strand at 4573.386 kb on + strand at 4573.386 kb on + strand at 4573.386 kb on + strand at 4573.386 kb on + strand at 4573.386 kb on + strand at 4573.386 kb on + strand at 4573.387 kb on - strand at 4573.387 kb on - strand at 4573.387 kb on - strand at 4573.387 kb on - strand at 4573.434 kb on + strand at 4573.435 kb on - strand at 4573.435 kb on - strand at 4573.435 kb on - strand at 4573.679 kb on + strand at 4573.795 kb on + strand at 4573.873 kb on - strand at 4573.873 kb on - strand at 4573.873 kb on - strand at 4573.966 kb on - strand at 4574.082 kb on + strand at 4574.083 kb on - strand at 4574.083 kb on - strand at 4574.083 kb on - strand at 4574.239 kb on - strand at 4574.357 kb on + strand at 4574.357 kb on + strand at 4574.358 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.016 mg/mL remove 4,571,986 + +0.9 4,571,986 + -0.5 4,571,986 + -1.1 4,571,987 - -1.0 4,572,056 + -1.3 4,572,056 + -0.2 4,572,057 - -0.6 4,572,088 + +0.2 4,572,385 - Pf1N1B4_4131 0.62 -1.8 4,572,621 + Pf1N1B4_4132 0.35 +1.2 4,572,621 + Pf1N1B4_4132 0.35 +0.5 4,572,621 + Pf1N1B4_4132 0.35 -1.4 4,572,732 - Pf1N1B4_4132 0.68 -0.9 4,572,784 + Pf1N1B4_4132 0.83 +0.8 4,572,922 + -0.2 4,573,074 + Pf1N1B4_4133 0.31 -2.5 4,573,074 + -1.9 4,573,074 + Pf1N1B4_4133 0.31 -1.4 4,573,074 + Pf1N1B4_4133 0.31 -0.6 4,573,074 + +2.8 4,573,074 + +2.6 4,573,074 + Pf1N1B4_4133 0.31 -0.6 4,573,074 + Pf1N1B4_4133 0.31 -1.4 4,573,074 + Pf1N1B4_4133 0.31 -0.8 4,573,075 - -0.1 4,573,075 - Pf1N1B4_4133 0.32 -0.8 4,573,288 - +0.2 4,573,294 - Pf1N1B4_4133 0.79 +1.6 4,573,375 + -0.4 4,573,376 - -0.4 4,573,386 + -0.8 4,573,386 + +0.3 4,573,386 + -0.4 4,573,386 + -0.0 4,573,386 + -1.1 4,573,386 + -0.3 4,573,387 - +0.4 4,573,387 - -1.6 4,573,387 - +0.2 4,573,387 - +0.4 4,573,434 + -0.2 4,573,435 - -0.1 4,573,435 - +0.5 4,573,435 - +0.8 4,573,679 + -0.8 4,573,795 + -1.1 4,573,873 - +0.2 4,573,873 - -1.9 4,573,873 - +1.2 4,573,966 - -0.0 4,574,082 + +0.5 4,574,083 - +0.0 4,574,083 - +0.1 4,574,083 - -0.6 4,574,239 - -0.5 4,574,357 + +0.6 4,574,357 + +0.2 4,574,358 - -0.1
Or see this region's nucleotide sequence