Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3434

Experiment: Paraquat dichloride 0.016 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.016 mg/mL
3,826,306	+		Pf1N1B4_3432	0.87	-0.8
3,826,306	+		Pf1N1B4_3432	0.87	-0.5
3,826,307	-		Pf1N1B4_3432	0.88	+0.5
3,826,307	-		Pf1N1B4_3432	0.88	+0.5
3,826,307	-		Pf1N1B4_3432	0.88	-0.5
3,826,374	-				-0.7
3,826,388	+				-1.7
3,826,388	+				-1.1
3,826,388	+				-1.5
3,826,388	+				-0.8
3,826,388	+				-0.5
3,826,388	+				-0.1
3,826,388	+				-0.5
3,826,388	+				-0.2
3,826,388	+				-1.0
3,826,388	+				-0.8
3,826,388	+				-0.8
3,826,388	+				-0.9
3,826,388	+				-1.5
3,826,389	-				-1.1
3,826,389	-				-2.7
3,826,389	-				+0.5
3,826,389	-				-0.7
3,826,389	-				-0.1
3,826,401	+				+0.5
3,826,401	+				-0.5
3,826,401	+				+0.3
3,826,402	-				+1.5
3,826,402	-				-1.0
3,826,402	-				-2.2
3,826,402	-				-0.1
3,826,566	+		Pf1N1B4_3433	0.25	+2.5
3,826,566	+		Pf1N1B4_3433	0.25	-2.3
3,826,566	+		Pf1N1B4_3433	0.25	-0.3
3,826,567	-		Pf1N1B4_3433	0.25	+0.3
3,826,567	-		Pf1N1B4_3433	0.25	-0.7
3,826,567	-		Pf1N1B4_3433	0.25	+0.9
3,826,611	+		Pf1N1B4_3433	0.32	+0.7
3,826,611	+		Pf1N1B4_3433	0.32	-0.4
3,826,612	-				-0.5
3,826,719	+		Pf1N1B4_3433	0.47	-1.2
3,826,719	+		Pf1N1B4_3433	0.47	-0.8
3,826,719	+		Pf1N1B4_3433	0.47	-1.9
3,826,719	+		Pf1N1B4_3433	0.47	+0.2
3,826,720	-		Pf1N1B4_3433	0.47	+1.5
3,826,720	-		Pf1N1B4_3433	0.47	-0.5
3,826,812	+		Pf1N1B4_3433	0.61	-0.1
3,826,813	-		Pf1N1B4_3433	0.61	-0.1
3,826,813	-		Pf1N1B4_3433	0.61	-0.9
3,826,813	-		Pf1N1B4_3433	0.61	-0.7
3,826,813	-		Pf1N1B4_3433	0.61	-1.7
3,826,861	-		Pf1N1B4_3433	0.68	-1.1
3,826,861	-		Pf1N1B4_3433	0.68	-0.8
3,826,861	-		Pf1N1B4_3433	0.68	-1.2
3,826,861	-		Pf1N1B4_3433	0.68	+0.3
3,826,962	+		Pf1N1B4_3433	0.82	-0.8
3,826,962	+		Pf1N1B4_3433	0.82	-0.9
3,826,962	+		Pf1N1B4_3433	0.82	-1.7
3,826,962	+		Pf1N1B4_3433	0.82	-0.5
3,826,963	-		Pf1N1B4_3433	0.82	-2.7
3,826,963	-		Pf1N1B4_3433	0.82	-2.3
3,826,963	-		Pf1N1B4_3433	0.82	-0.3
3,826,963	-		Pf1N1B4_3433	0.82	-0.9
3,826,963	-		Pf1N1B4_3433	0.82	-1.2
3,826,963	-		Pf1N1B4_3433	0.82	-0.5
3,826,963	-		Pf1N1B4_3433	0.82	-2.3
3,826,980	+		Pf1N1B4_3433	0.85	+0.2
3,826,980	+		Pf1N1B4_3433	0.85	-1.7
3,826,980	+		Pf1N1B4_3433	0.85	-0.3
3,826,980	+		Pf1N1B4_3433	0.85	-0.5
3,826,980	+		Pf1N1B4_3433	0.85	+0.5
3,826,980	+		Pf1N1B4_3433	0.85	-2.2
3,826,981	-		Pf1N1B4_3433	0.85	+0.8
3,826,981	-		Pf1N1B4_3433	0.85	-1.9
3,826,981	-		Pf1N1B4_3433	0.85	+0.3
3,827,001	+		Pf1N1B4_3433	0.88	-0.8
3,827,001	+		Pf1N1B4_3433	0.88	-0.8
3,827,001	+		Pf1N1B4_3433	0.88	-0.9
3,827,001	+		Pf1N1B4_3433	0.88	-1.8
3,827,001	+		Pf1N1B4_3433	0.88	-0.5
3,827,002	-		Pf1N1B4_3433	0.88	+0.9
3,827,002	-		Pf1N1B4_3433	0.88	-1.4
3,827,002	-		Pf1N1B4_3433	0.88	+0.5
3,827,002	-		Pf1N1B4_3433	0.88	-1.0
3,827,002	-		Pf1N1B4_3433	0.88	-0.5
3,827,089	-				-0.1
3,827,089	-				-1.2
3,827,182	+				-1.1
3,827,182	+				-0.8
3,827,182	+				-0.5
3,827,182	+				+0.5
3,827,183	-				-2.8
3,827,183	-				-0.1
3,827,183	-				-0.8
3,827,183	-				+0.5
3,827,183	-				-1.0
3,827,620	+		Pf1N1B4_3434	0.48	-0.2
3,827,620	+		Pf1N1B4_3434	0.48	-1.7
3,827,620	+				+1.5
3,827,620	+		Pf1N1B4_3434	0.48	-0.9
3,827,620	+		Pf1N1B4_3434	0.48	-1.7
3,827,621	-		Pf1N1B4_3434	0.48	-1.1
3,827,621	-		Pf1N1B4_3434	0.48	-0.1
3,827,621	-		Pf1N1B4_3434	0.48	+0.2
3,827,621	-		Pf1N1B4_3434	0.48	-1.1
3,827,621	-		Pf1N1B4_3434	0.48	-2.2
3,827,621	-		Pf1N1B4_3434	0.48	-0.4
3,827,621	-		Pf1N1B4_3434	0.48	+0.5
3,827,621	-		Pf1N1B4_3434	0.48	-0.7
3,827,621	-		Pf1N1B4_3434	0.48	-2.2
3,827,621	-		Pf1N1B4_3434	0.48	-1.1
3,827,621	-		Pf1N1B4_3434	0.48	-1.4
3,827,621	-		Pf1N1B4_3434	0.48	-1.2
3,827,621	-		Pf1N1B4_3434	0.48	-0.5
3,827,852	-		Pf1N1B4_3434	0.69	-0.4
3,828,088	-		Pf1N1B4_3434	0.90	-0.9
3,828,232	+				+2.3
3,828,232	+				-0.8
3,828,232	+				-0.5
3,828,232	+				-0.5
3,828,232	+				-0.5
3,828,232	+				-0.5
3,828,232	+				-0.1
3,828,258	+				+0.9
3,828,258	+				-1.3
3,828,265	+				-0.5
3,828,266	-				+0.2
3,828,357	+		Pf1N1B4_3435	0.17	+1.5
3,828,357	+		Pf1N1B4_3435	0.17	+0.1
3,828,358	-		Pf1N1B4_3435	0.17	+0.1
3,828,415	-		Pf1N1B4_3435	0.24	+0.2
3,828,625	+		Pf1N1B4_3435	0.52	-1.1
3,828,625	+		Pf1N1B4_3435	0.52	+0.6
3,828,991	+				+1.3
3,828,991	+				+0.9
3,828,992	-				-1.1
3,828,992	-				-2.4